Evidence map›Paper›PMID 25210888›Full record

ArticlePloS one2014

Gene expression profiling in Entamoeba histolytica identifies key components in iron uptake and metabolism.

Nora Adriana Hernández-Cuevas, Christian Weber, Chung-Chau Hon, Nancy Guillen

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Stem-Loop Structures in Iron-Regulated mRNAs ofInternational journal of environmental research and public health · 2023
    Article
  3. Insights into the Mechanisms ofAntioxidants (Basel, Switzerland) · 2022
    Article
  4. Article
  5. Advances inFrontiers in microbiology · 2019
    Review
  6. Article
  7. Iron status as a confounder in the gender gap in survival under extreme conditions.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  8. Review
  9. Article
  10. Article
  11. Recent advances inF1000Research · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Nora Adriana Hernández-CuevasInstitut Pasteur, Unité Biologie Cellulaire du Parasitisme, Paris, France; INSERM U786, Paris, France.
Christian WeberInstitut Pasteur, Unité Biologie Cellulaire du Parasitisme, Paris, France; INSERM U786, Paris, France.
Chung-Chau HonInstitut Pasteur, Unité Biologie Cellulaire du Parasitisme, Paris, France; INSERM U786, Paris, France.
Nancy GuillenInstitut Pasteur, Unité Biologie Cellulaire du Parasitisme, Paris, France; INSERM U786, Paris, France.
Inserm · FRInstitut Pasteur · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Entamoeba histolytica is an ameboid parasite that causes colonic dysentery and liver abscesses in humans. The parasite encounters dramatic changes in iron concentration during its invasion of the host, with relatively low levels in the intestinal lumen and then relatively high levels in the blood and liver. The liver notably contains sources of iron; therefore, the parasite's ability to use these sources might be relevant to its survival in the liver and thus the pathogenesis of liver abscesses. The objective of the present study was to identify factors involved in iron uptake, use and storage in E. histolytica. We compared the respective transcriptomes of E. histolytica trophozoites grown in normal medium (containing around 169 µM iron), low-iron medium (around 123 µM iron), iron-deficient medium (around 91 µM iron), and iron-deficient medium replenished with hemoglobin. The differentially expressed genes included those coding for the ATP-binding cassette transporters and major facilitator transporters (which share homology with bacterial siderophores and heme transporters) and genes involved in heme biosynthesis and degradation. Iron deficiency was associated with increased transcription of genes encoding a subset of cell signaling molecules, some of which have previously been linked to adaptation to the intestinal environment and virulence. The present study is the first to have assessed the transcriptome of E. histolytica grown under various iron concentrations. Our results provide insights into the pathways involved in iron uptake and metabolism in this parasite.

Indexed as

ATP-Binding Cassette TransportersEntamoebaGene Expression ProfilingGene Expression RegulationIronMetabolic Networks and PathwaysMicroarray AnalysisTranscriptomeATP-Binding Cassette TransportersIron

Identifiers

PMID25210888
PMCPMC4161402
OpenAlexW2019921709

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.