Evidence map›Paper›PMID 25210037›Full record

ArticleThe Journal of biological chemistry2014

Endoplasmic reticulum-associated inactivation of the hormone jasmonoyl-L-isoleucine by multiple members of the cytochrome P450 94 family in Arabidopsis.

Abraham J Koo, Caitlin Thireault, Starla Zemelis, Arati N Poudel, Tong Zhang, Naoki Kitaoka, Federica Brandizzi, Hideyuki Matsuura, Gregg A Howe

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
11.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 123 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Molecular insights into volatile organic compound sensing and signaling in plants.The Plant journal : for cell and molecular biology · 2026
    Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Arabidopsis GH3.10 conjugates jasmonates.Plant biology (Stuttgart, Germany) · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Abraham J KooFrom the Department of Energy-Plant Research Laboratory and the Division of Biochemistry, Interdisciplinary Plant Group, and kooaj@missouri.edu.
Caitlin ThireaultFrom the Department of Energy-Plant Research Laboratory and.
Starla ZemelisFrom the Department of Energy-Plant Research Laboratory and.
Arati N Poudelthe Division of Biochemistry, Interdisciplinary Plant Group, and Division of Plant Sciences, University of Missouri, Columbia, Missouri 65211.
Tong Zhangthe Division of Biochemistry, Interdisciplinary Plant Group, and.
Naoki KitaokaDivision of Applied Bioscience, Research Faculty of Agriculture, Hokkaido University, Sapporo 060-8589, Japan, and.
Federica BrandizziFrom the Department of Energy-Plant Research Laboratory and.
Hideyuki MatsuuraDivision of Applied Bioscience, Research Faculty of Agriculture, Hokkaido University, Sapporo 060-8589, Japan, and.
Gregg A HoweFrom the Department of Energy-Plant Research Laboratory and Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824.
Michigan State University · USHokkaido University · JPUniversity of Missouri · US

Funding

REGULATION OF DEFENSE SIGNALING IN TOMATOR01GM057795 · NIGMS · MICHIGAN STATE UNIVERSITY · PI HOWE, GREGG A · 1998 to 2012
$3.2M
NIGMS NIH HHS GM57795NIGMS NIH HHS R01 GM057795
6 · The paper itself

Abstract

The plant hormone jasmonate (JA) controls diverse aspects of plant immunity, growth, and development. The amplitude and duration of JA responses are controlled in large part by the intracellular level of jasmonoyl-L-isoleucine (JA-Ile). In contrast to detailed knowledge of the JA-Ile biosynthetic pathway, little is known about enzymes involved in JA-Ile metabolism and turnover. Cytochromes P450 (CYP) 94B3 and 94C1 were recently shown to sequentially oxidize JA-Ile to hydroxy (12OH-JA-Ile) and dicarboxy (12COOH-JA-Ile) derivatives. Here, we report that a third member (CYP94B1) of the CYP94 family also participates in oxidative turnover of JA-Ile in Arabidopsis. In vitro studies showed that recombinant CYP94B1 converts JA-Ile to 12OH-JA-Ile and lesser amounts of 12COOH-JA-Ile. Consistent with this finding, metabolic and physiological characterization of CYP94B1 loss-of-function and overexpressing plants demonstrated that CYP94B1 and CYP94B3 coordinately govern the majority (>95%) of 12-hydroxylation of JA-Ile in wounded leaves. Analysis of CYP94-promoter-GUS reporter lines indicated that CYP94B1 and CYP94B3 serve unique and overlapping spatio-temporal roles in JA-Ile homeostasis. Subcellular localization studies showed that CYP94s involved in conversion of JA-Ile to 12COOH-JA-Ile reside on endoplasmic reticulum (ER). In vitro studies further showed that 12COOH-JA-Ile, unlike JA-Ile, fails to promote assembly of COI1-JAZ co-receptor complexes. The double loss-of-function mutant of CYP94B3 and ILL6, a JA-Ile amidohydrolase, displayed a JA profile consistent with the collaborative action of the oxidative and the hydrolytic pathways in JA-Ile turnover. Collectively, our results provide an integrated view of how multiple ER-localized CYP94 and JA amidohydrolase enzymes attenuate JA signaling during stress responses.

Indexed as

Multigene FamilyArabidopsisArabidopsis ProteinsBiocatalysisCyclopentanesCytochrome P-450 Enzyme SystemDNA, BacterialEndoplasmic ReticulumHomeostasisHydrolysisIsoleucineMetabolic Networks and PathwaysMutagenesis, InsertionalMutationOrgan SpecificityOxidation-ReductionArabidopsis ProteinsCyclopentanesCytochrome P-450 Enzyme SystemDNA, BacterialIsoleucinejasmonic acidjasmonoyl-isoleucineOxylipinsT-DNACytochrome P450Fatty Acid OxidationJasmonatePlant BiochemistryPlant HormoneStress Response

Identifiers

PMID25210037
PMCPMC4207986
OpenAlexW2052260682

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.