Evidence map›Paper›PMID 25209246›Full record

ArticleDevelopment (Cambridge, England)2014

The splicing factor PQBP1 regulates mesodermal and neural development through FGF signaling.

Yasuno Iwasaki, Gerald H Thomsen

Open access · greenAbstract read
In one paragraph

Article in Development (Cambridge, England), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Yasuno IwasakiDepartment of Biochemistry and Cell Biology, Center for Developmental Genetics, Stony Brook University, Stony Brook, NY 11794-5215, USA.
Gerald H ThomsenDepartment of Biochemistry and Cell Biology, Center for Developmental Genetics, Stony Brook University, Stony Brook, NY 11794-5215, USA gerald.h.thomsen@stonybrook.edu.
Stony Brook University · US

Funding

Smurf Ubiquitin Ligases in Xenopus DevelopmentR01HD032429 · NICHD · STATE UNIVERSITY NEW YORK STONY BROOK · PI THOMSEN, GERALD H · 1997 to 2005
$1.9M
Embryonic Functional Screen of a TGF?? Protein-Protein Interaction NetworkR03HD064908 · NICHD · STATE UNIVERSITY NEW YORK STONY BROOK · PI THOMSEN, GERALD H · 2010 to 2011
$154k
NICHD NIH HHS R01 HD032429NICHD NIH HHS R01HD032429NICHD NIH HHS R03 HD064908NICHD NIH HHS R03HD064908
6 · The paper itself

Abstract

Alternative splicing of pre-mRNAs is an important means of regulating developmental processes, yet the molecular mechanisms governing alternative splicing in embryonic contexts are just beginning to emerge. Polyglutamine-binding protein 1 (PQBP1) is an RNA-splicing factor that, when mutated, in humans causes Renpenning syndrome, an X-linked intellectual disability disease characterized by severe cognitive impairment, but also by physical defects that suggest PQBP1 has broader functions in embryonic development. Here, we reveal essential roles for PQBP1 and a binding partner, WBP11, in early development of Xenopus embryos. Both genes are expressed in the nascent mesoderm and neurectoderm, and morpholino knockdown of either causes defects in differentiation and morphogenesis of the mesoderm and neural plate. At the molecular level, knockdown of PQBP1 in Xenopus animal cap explants inhibits target gene induction by FGF but not by BMP, Nodal or Wnt ligands, and knockdown of either PQBP1 or WBP11 in embryos inhibits expression of fgf4 and FGF4-responsive cdx4 genes. Furthermore, PQBP1 knockdown changes the alternative splicing of FGF receptor-2 (FGFR2) transcripts, altering the incorporation of cassette exons that generate receptor variants (FGFR2 IIIb or IIIc) with different ligand specificities. Our findings may inform studies into the mechanisms underlying Renpenning syndrome.

Indexed as

AnimalsCloning, MolecularDNA, ComplementaryDNA PrimersFibroblast Growth FactorsFluorescent Antibody TechniqueGene Expression Regulation, DevelopmentalGene Knockdown TechniquesImmunoprecipitationIn Situ HybridizationMesodermMorpholinosNerve Tissue ProteinsPlasmidsReal-Time Polymerase Chain ReactionRNA-Binding ProteinsDNA, ComplementaryDNA PrimersFibroblast Growth FactorsMorpholinosNerve Tissue ProteinsPQBP1 protein, XenopusRNA-Binding ProteinsXenopus ProteinsAlternative splicingFGFFGF receptorMesodermNeuralPQBP1Renpenning syndromeWBP11Xenopus

Identifiers

PMID25209246
PMCPMC4197583
OpenAlexW2107067280

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.