Evidence map›Paper›PMID 25206987›Full record

ArticleBalkan medical journal2012

Molecular diversity of drug resistant mycobacterium tuberculosis strains in Western Turkey.

Süheyla Sürücüoğlu, Selami Günal, Nuri Ozkütük, Can Biçmen, Ayşe Ozsöz, Hörü Gazi, Rıza Durmaz

Open access · diamondAbstract read
In one paragraph

Article in Balkan medical journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 94% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Süheyla SürücüoğluDepartment of Medical Microbiology, Faculty of Medicine, Celal Bayar University, Manisa, Turkey.
Selami GünalDepartment of Medical Microbiology, Faculty of Medicine, İnönü University, Malatya, Turkey.
Nuri OzkütükDepartment of Medical Microbiology, Faculty of Medicine, Celal Bayar University, Manisa, Turkey.
Can BiçmenDepartment of Medical Microbiology, Dr. Suat Seren Chest Diseases and Surgery Training and Research Hospital, İzmir, Turkey.
Ayşe OzsözDepartment of Tuberculosis and Chest Diseases, Dr. Suat Seren Chest Diseases and Surgery Training and Research Hospital, İzmir, Turkey.
Hörü GaziDepartment of Medical Microbiology, Faculty of Medicine, Celal Bayar University, Manisa, Turkey.
Rıza DurmazDepartment of Medical Microbiology, Faculty of Medicine, İnönü University, Malatya, Turkey.
Manisa Celal Bayar University · TRInonu University · TRIzmir University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveThe aim of this study was to investigate the molecular diversity and clonal relationship of drug resistant Mycobacterium tuberculosis strains isolated in Western Turkey. MATERIALS AND

methodsA total of 87 strains isolated between 2006 and 2009, eight of which were rifampicin monoresistant and 79 were multidrug resistant, were analyzed with IS6110 RFLP and spoligotyping methods.

resultsThe results of spoligotyping showed that 7% of the strains were orphans, and 8% were undefined for family in the SpolDB4 database. Major families of the strains were LAM (38%), T (35%), Haarlem (7%), Beijing (2%), S (2%) and U (1%) families. The clustering rate by spoligotyping was calculated as 75%. The most predominant SIT cluster was SIT41 (29%). According to the results of IS6110 RFLP, 71 different patterns of IS6110 were observed. Low copy number was found in 26% of the strains. When the results of two methods were combined, the final clustering rate was calculated as 26%.

conclusionsThe genotypical distribution of drug resistant tuberculosis isolates in our region indicates genetic diversity and the clustering rate was found low in our region. However, more comprehensive and long-term molecular epidemiological studies are needed to control the drug resistant strains.

Indexed as

drug resistanceepidemiologygenotypingMycobacterium tuberculosis

Identifiers

PMID25206987
PMCPMC4115856
OpenAlexW1975993478

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.