Evidence map›Paper›PMID 25205039›Full record

ArticleMolecular oncology2015

Integrated miRNA and mRNA profiling of tumor-educated macrophages identifies prognostic subgroups in estrogen receptor-positive breast cancer.

Annalen Bleckmann, Andreas Leha, Stephan Artmann, Kerstin Menck, Gabriela Salinas-Riester, Claudia Binder, Tobias Pukrop, Tim Beissbarth, Florian Klemm

Abstract read
In one paragraph

Article in Molecular oncology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Annalen BleckmannDept. of Hematology/Oncology, University Medical Center Göttingen, 37099 Göttingen, Germany; Dept. of Medical Statistics, University Medical Center Göttingen, 37099 Göttingen, Germany. Electronic address: a.bleckmann@med.uni-goettingen.de.
Andreas LehaDept. of Medical Statistics, University Medical Center Göttingen, 37099 Göttingen, Germany. Electronic address: Andreas.Leha@med.uni-goettingen.de.
Stephan ArtmannDept. of Medical Statistics, University Medical Center Göttingen, 37099 Göttingen, Germany. Electronic address: artmanns@student.ethz.ch.
Kerstin MenckDept. of Hematology/Oncology, University Medical Center Göttingen, 37099 Göttingen, Germany. Electronic address: Kerstin.Menck@med.uni-goettingen.de.
Gabriela Salinas-RiesterDept. of Developmental Biochemistry, University Medical Center Göttingen, 37099 Göttingen, Germany. Electronic address: gsalina@gwdg.de.
Claudia BinderDept. of Hematology/Oncology, University Medical Center Göttingen, 37099 Göttingen, Germany. Electronic address: claudia.binder@med.uni-goettingen.de.
Tobias PukropDept. of Hematology/Oncology, University Medical Center Göttingen, 37099 Göttingen, Germany. Electronic address: tobias.pukrop@med.uni-goettingen.de.
Tim BeissbarthDept. of Medical Statistics, University Medical Center Göttingen, 37099 Göttingen, Germany. Electronic address: Tim.Beissbarth@med.uni-goettingen.de.
Florian KlemmDept. of Hematology/Oncology, University Medical Center Göttingen, 37099 Göttingen, Germany. Electronic address: florian.klemm@med.uni-goettingen.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionVarious studies have identified aberrantly expressed miRNAs in breast cancer and demonstrated an association between distinct miRNAs and malignant progression as well as metastasis. Even though tumor-associated macrophages (TAM) are known mediators of these processes, little is known regarding their miRNA expression upon education by malignant cells in vivo.

methodsWe profiled miRNA and mRNA expression of in vitro tumor-educated macrophages (TEM) by indirectly co-culturing with estrogen-receptor-positive (ER+) MCF-7 breast cancer cells. The prognostic power of the resulting miRNA list was investigated in primary breast cancer datasets and compared to other signatures. Furthermore, miRNA expression levels were correlated to mRNA expression of macrophage markers and the impact on prognosis was assessed.

resultsThrough the evaluation of the group effects between differentially-expressed miRNAs and their target mRNAs in TEM, the power of detecting regulated miRNAs was greatly increased. The resulting list of 96 miRNAs predicts disease-free survival (DFS) in external datasets of ER+ breast cancer patients and performs well in comparison with other miRNA signatures. Clustering with the predefined miRNA list revealed a significant difference in survival between the two resulting patient groups. Furthermore, an optimized miRNA list, based on correlations with macrophages markers, proved even more capable at identifying patient clusters significantly differing in DFS.

conclusionsIn vitro profiling of TEM and subsequent bioinformatic verification identified miRNAs with a high prognostic power for DFS when transferred into the clinical setting of primary breast cancer. The resulting miRNAs not only verify previously established findings but also lead to new prognostic markers. Furthermore, our data suggest that TAM contribute to the total miRNA expression profile of ER + breast cancers.

Indexed as

Receptors, EstrogenBreast NeoplasmsCoculture TechniquesDisease-Free SurvivalFemaleGene Expression ProfilingHumansMacrophagesMCF-7 CellsMicroRNAsRNA, MessengerSurvival RateMicroRNAsReceptors, EstrogenRNA, MessengerBreast cancermiRNATumor-associated macrophages

Identifiers

PMID25205039
PMCPMC5528681

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.