Evidence map›Paper›PMID 25204387›Full record

ArticleAnnals of botany2014

Evidence for land plant cell wall biosynthetic mechanisms in charophyte green algae.

Maria D Mikkelsen, Jesper Harholt, Peter Ulvskov, Ida E Johansen, Jonatan U Fangel, Monika S Doblin, Antony Bacic, William G T Willats

Open access · bronzeAbstract read
In one paragraph

Article in Annals of botany, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
9.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 81 citations in OpenAlex.

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  9. Zygospore formation in Zygnematophyceae predates several land plant traits.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Maria D MikkelsenDepartment of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg, Denmark mdmi@plen.ku.dk.
Jesper HarholtDepartment of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg, Denmark.
Peter UlvskovDepartment of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg, Denmark.
Ida E JohansenDepartment of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg, Denmark.
Jonatan U FangelDepartment of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg, Denmark.
Monika S DoblinARC Centre of Excellence in Plant Cell Walls, School of Botany, University of Melbourne, Victoria 3010, Australia.
Antony BacicARC Centre of Excellence in Plant Cell Walls, School of Botany, University of Melbourne, Victoria 3010, Australia.
William G T WillatsDepartment of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg, Denmark.
University of Copenhagen · DKARC Centre of Excellence in Plant Energy Biology · AUUniversity of Melbourne · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimsThe charophyte green algae (CGA) are thought to be the closest living relatives to the land plants, and ancestral CGA were unique in giving rise to the land plant lineage. The cell wall has been suggested to be a defining structure that enabled the green algal ancestor to colonize land. These cell walls provide support and protection, are a source of signalling molecules, and provide developmental cues for cell differentiation and elongation. The cell wall of land plants is a highly complex fibre composite, characterized by cellulose cross-linked by non-cellulosic polysaccharides, such as xyloglucan, embedded in a matrix of pectic polysaccharides. How the land plant cell wall evolved is currently unknown: early-divergent chlorophyte and prasinophyte algae genomes contain a low number of glycosyl transferases (GTs), while land plants contain hundreds. The number of GTs in CGA is currently unknown, as no genomes are available, so this study sought to give insight into the evolution of the biosynthetic machinery of CGA through an analysis of available transcriptomes.

methodsAvailable CGA transcriptomes were mined for cell wall biosynthesis GTs and compared with GTs characterized in land plants. In addition, gene cloning was employed in two cases to answer important evolutionary questions. KEY

resultsGenetic evidence was obtained indicating that many of the most important core cell wall polysaccharides have their evolutionary origins in the CGA, including cellulose, mannan, xyloglucan, xylan and pectin, as well as arabino-galactan protein. Moreover, two putative cellulose synthase-like D family genes (CSLDs) from the CGA species Coleochaete orbicularis and a fragment of a putative CSLA/K-like sequence from a CGA Spirogyra species were cloned, providing the first evidence that all the cellulose synthase/-like genes present in early-divergent land plants were already present in CGA.

conclusionsThe results provide new insights into the evolution of cell walls and support the notion that the CGA were pre-adapted to life on land by virtue of the their cell wall biosynthetic capacity. These findings are highly significant for understanding plant cell wall evolution as they imply that some features of land plant cell walls evolved prior to the transition to land, rather than having evolved as a result of selection pressures inherent in this transition.

Indexed as

Base SequenceBiological EvolutionCell WallCharophyceaeEmbryophytaGlucosyltransferasesGlycoproteinsGlycosyltransferasesMolecular Sequence DataMultigene FamilyPhylogenyPlant ProteinsPolysaccharidesSequence Analysis, DNASpirogyraTranscriptomecellulose synthaseGlucosyltransferasesGlycoproteinsGlycosyltransferasesPlant ProteinsPolysaccharidesCAZycellulose synthase-likecharophyte green algaeColeochaete orbicularisCSLACSLDCSLKevolutionglycosyl transferasesPlant cell wallpolysaccharidesSpirogyratranscriptomes

Identifiers

PMID25204387
PMCPMC4195564
OpenAlexW2032772345

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.