ArticleApplications in plant sciences2014
Characterization of microsatellite loci in the Himalayan lichen fungus Lobaria pindarensis (Lobariaceae).
Article in Applications in plant sciences, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.
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Who cites it
5 citing papers in PubMed.
- Phylogeographic analyses of an epiphytic foliose lichen show multiple dispersal events westward from the Hengduan Mountains of Yunnan into the Himalayas.Ecology and evolution · 2022Article
- Indigenous knowledge and use of lichens by the lichenophilic communities of the Nepal Himalaya.Journal of ethnobiology and ethnomedicine · 2017Article
- Characterization of fungus-specific microsatellite markers in the lichen-forming fungus Parmelina carporrhizans (Parmeliaceae).Applications in plant sciences · 2014Article
- Characterization of fungus-specific microsatellite markers in the lichen fungus Usnea subfloridana (Parmeliaceae).Applications in plant sciences · 2014Article
- Characterization of microsatellite loci in lichen-forming fungi of Bryoria section Implexae (Parmeliaceae).Applications in plant sciences · 2014Article
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Abstract
unlabelledPREMISE OF THE STUDY: Microsatellite loci were developed for the rare, Himalayan, endemic haploid lichen fungus, Lobaria pindarensis, to study its population subdivision and the species' response to forest disturbance and fragmentation. • METHODS AND
resultsWe developed 18 polymorphic microsatellite markers using 454 pyrosequencing data and assessed them in 109 individuals. The number of alleles per locus ranged from three to 11 with an average of 6.9. Nei's unbiased gene diversity, averaged over loci, ranged from 0.514 to 0.685 in the three populations studied. The cross-amplification success with related species (L. chinensis, L. gyrophorica, L. isidiophora, L. orientalis, L. pulmonaria, L. spathulata, and Lobaria sp.) was generally high and decreased with decreasing relationship to L. pindarensis. •
conclusionsThe new markers will allow the study of genetic diversity and differentiation within L. pindarensis across its distribution. Moreover, they will enable us to study the effects of forest management on the genetic population structure of this tree-colonizing lichen and to carry out population genetic studies of related species in East Asia.
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