ArticleApplications in plant sciences2013
Estimating the nucleotide diversity in Ceratodon purpureus (Ditrichaceae) from 218 conserved exon-primed, intron-spanning nuclear loci.
Article in Applications in plant sciences, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.
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3 citing papers in PubMed, 17 citations in OpenAlex.
- Microarthropod contributions to fitness variation in the common mossProceedings. Biological sciences · 2021Article
- Efficient purging of deleterious mutations in plants with haploid selfing.Genome biology and evolution · 2014Article
- Recent gene-capture on the UV sex chromosomes of the moss Ceratodon purpureus.Evolution; international journal of organic evolution · 2013Article
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Authors and funding
5 authors at 2 institutions in 1 country.
Funding
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Abstract
unlabelledPREMISE OF THE STUDY: We developed and tested primers for 218 nuclear loci for studying population genetics, phylogeography, and genome evolution in bryophytes. • METHODS AND
resultsWe aligned expressed sequence tags (ESTs) from Ceratodon purpureus to the Physcomitrella patens genome sequence, and designed primers that are homologous to conserved exons but span introns in the P. patens genome. We tested these primers on four isolates from New York, USA; Otavalo, Ecuador; and two laboratory isolates from Austria (WT4 and GG1). The median genome-wide nucleotide diversity was 0.008 substitutions/site, but the range was large (0-0.14), illustrating the among-locus heterogeneity in the species. •
conclusionsThese loci provide a valuable resource for finely resolved, genome-wide population genetic and species-level phylogenetic analyses of C. purpureus and its relatives.
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