Evidence map›Paper›PMID 25202010›Full record

ArticleThe Journal of biological chemistry2014

Asp-52 in combination with Asp-398 plays a critical role in ATP hydrolysis of chaperonin GroEL.

Ayumi Koike-Takeshita, Kaoru Mitsuoka, Hideki Taguchi

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Physicochemical Properties of the Mammalian Molecular Chaperone HSP60.International journal of molecular sciences · 2018
    Article
  5. Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Ayumi Koike-TakeshitaFrom the Department of Applied Bioscience, Kanagawa Institute of Technology, 1030 Shimo-ogino, Atsugi, Kanagawa 243-0292, Japan.
Kaoru MitsuokaTechnology Research Association for Next Generation Natural Products Chemistry, AIST Tokyo Waterfront, 2-3-26, Aomi, Koto-ku, Tokyo 135-0064, Japan, and.
Hideki TaguchiGraduate School of Bioscience and Biotechnology, Tokyo Institute of Technology, B-56, 4259 Nagatsuta, Midori-ku, Yokohama 226-8501, Japan taguchi@bio.titech.ac.jp.
Kanagawa Institute of Technology · JPTokyo Institute of Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Escherichia coli chaperonin GroEL is a double-ring chaperone that assists protein folding with the aid of GroES and ATP. Asp-398 in GroEL is known as one of the critical residues on ATP hydrolysis because GroEL(D398A) mutant is deficient in ATP hydrolysis (<2% of the wild type) but not in ATP binding. In the archaeal Group II chaperonin, another aspartate residue, Asp-52 in the corresponding E. coli GroEL, in addition to Asp-398 is also important for ATP hydrolysis. We investigated the role of Asp-52 in GroEL and found that ATPase activity of GroEL(D52A) and GroEL(D52A/D398A) mutants was ∼ 20% and <0.01% of wild-type GroEL, respectively, indicating that Asp-52 in E. coli GroEL is also involved in the ATP hydrolysis. GroEL(D52A/D398A) formed a symmetric football-shaped GroEL-GroES complex in the presence of ATP, again confirming the importance of the symmetric complex during the GroEL ATPase cycle. Notably, the symmetric complex of GroEL(D52A/D398A) was extremely stable, with a half-time of ∼ 150 h (∼ 6 days), providing a good model to characterize the football-shaped complex.

Indexed as

Adenosine TriphosphateAspartic AcidBinding SitesChaperonin 10Chaperonin 60Escherichia coliHydrolysisMalate DehydrogenaseMutant ProteinsNegative StainingProtein FoldingProtein StabilityProtein SubunitsStructure-Activity RelationshipThiosulfate SulfurtransferaseAdenosine TriphosphateAspartic AcidChaperonin 10Chaperonin 60Malate DehydrogenaseMutant ProteinsProtein SubunitsThiosulfate SulfurtransferaseATPaseChaperoneChaperoninGroELGroESProtein AggregationProtein FoldingProtein Misfolding

Identifiers

PMID25202010
PMCPMC4208008
OpenAlexW2056842319

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.