Evidence map›Paper›PMID 25201972›Full record

Trial reportProceedings of the National Academy of Sciences of the United States of America2014

Genetic, anatomic, and clinical determinants of human serum sterol and vitamin D levels.

Ashlee R Stiles, Julia Kozlitina, Bonne M Thompson, Jeffrey G McDonald, Kevin S King, David W Russell

Abstract readClinical Trial
In one paragraph

Trial report in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Plasma Concentrations of Multiple Oxysterols and Risk of Colorectal Adenomas.Cancer prevention research (Philadelphia, Pa.) · 2024
    Trial
  3. Trial
  4. 27-Hydroxycholesterol, an Endogenous SERM, and Risk of Fracture in Postmenopausal Women: A Nested Case-Cohort Study in the Women's Health Initiative.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2019
    Trial
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Frontiers in endocrinology · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Nuclear Receptors and Lipid Sensing.Advances in experimental medicine and biology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ashlee R StilesDepartments of Molecular Genetics.
Julia KozlitinaInternal Medicine, and.
Bonne M ThompsonDepartments of Molecular Genetics.
Jeffrey G McDonaldDepartments of Molecular Genetics.
Kevin S KingRadiology, University of Texas Southwestern Medical Center, Dallas, TX 75390.
David W RussellDepartments of Molecular Genetics, David.Russell@UTSouthwestern.edu.

Funding

TRANSCRIPTIONAL REGULATION OF LDL RECEPTOR PROMOTERP01HL020948 · NHLBI · UT SOUTHWESTERN MEDICAL CENTER · PI GOLDSTEIN, JOSEPH L · 1985 to 2021
$103.1M
STEROL LIPIDSU54GM069338 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DENNIS, EDWARD A · 2003 to 2013
$72.2M
UT Southwestern Center for Translational Medicine (UL1/KL2/TL1)UL1TR001105 · NCATS · UT SOUTHWESTERN MEDICAL CENTER · PI TOTO, ROBERT DANIEL · 2013 to 2017
$24.5M
Role of ABCG5 and ABCG8 in Sterol MetabolismR37HL072304 · NHLBI · UT SOUTHWESTERN MEDICAL CENTER · PI HOBBS, HELEN HASKELL · 2008 to 2017
$4.5M
NCATS NIH HHS UL1 TR001105NHLBI NIH HHS 2P01HL20948NHLBI NIH HHS P01 HL020948NHLBI NIH HHS R37 HL072304NIGMS NIH HHS 5U54GM069338NIGMS NIH HHS U54 GM069338
6 · The paper itself

Abstract

An unknown fraction of the genome participates in the metabolism of sterols and vitamin D, two classes of lipids with diverse physiological and pathophysiological roles. Here, we used mass spectrometry to measure the abundance of >60 sterol and vitamin D derivatives in 3,230 serum samples from a well-phenotyped patient population. Twenty-nine of these lipids were detected in a majority of samples at levels that varied over thousands of fold in different individuals. Pairwise correlations between sterol and vitamin D levels revealed evidence for shared metabolic pathways, additional substrates for known enzymes, and transcriptional regulatory networks. Serum levels of multiple sterols and vitamin D metabolites varied significantly by sex, ethnicity, and age. A genome-wide association study identified 16 loci that were associated with levels of 19 sterols and 25-hydroxylated derivatives of vitamin D (P < 10(-7)). Resequencing, expression analysis, and biochemical experiments focused on one such locus (CYP39A1), revealed multiple loss-of-function alleles with additive effects on serum levels of the oxysterol, 24S-hydroxycholesterol, a substrate of the encoded enzyme. Body mass index, serum lipid levels, and hematocrit were strong phenotypic correlates of interindividual variation in multiple sterols and vitamin D metabolites. We conclude that correlating population-based analytical measurements with genotype and phenotype provides productive insight into human intermediary metabolism.

Indexed as

Body Mass IndexGenotypeSteroid HydroxylasesFemaleGenetic LociHumansHydroxycholesterolsMaleVitamin D24-hydroxycholesterolCYP39A1 protein, humanHydroxycholesterolsSteroid HydroxylasesVitamin Dgenotype–phenotype correlationhuman genetics

Identifiers

PMID25201972
PMCPMC4183318

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.