Evidence map›Paper›PMID 25201053›Full record

ArticleScientific reports2014

Screening of clock gene polymorphisms demonstrates association of a PER3 polymorphism with morningness-eveningness preference and circadian rhythm sleep disorder.

Akiko Hida, Shingo Kitamura, Yasuko Katayose, Mie Kato, Hiroko Ono, Hiroshi Kadotani, Makoto Uchiyama, Takashi Ebisawa, Yuichi Inoue, Yuichi Kamei and 3 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 120 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 1 country.

Akiko HidaDepartment of Psychophysiology, National Institute of Mental Health, National Center of Neurology and Psychiatry, Kodaira, Tokyo 187-8553, Japan.
Shingo KitamuraDepartment of Psychophysiology, National Institute of Mental Health, National Center of Neurology and Psychiatry, Kodaira, Tokyo 187-8553, Japan.
Yasuko KatayoseDepartment of Psychophysiology, National Institute of Mental Health, National Center of Neurology and Psychiatry, Kodaira, Tokyo 187-8553, Japan.
Mie KatoDepartment of Psychophysiology, National Institute of Mental Health, National Center of Neurology and Psychiatry, Kodaira, Tokyo 187-8553, Japan.
Hiroko OnoDepartment of Psychophysiology, National Institute of Mental Health, National Center of Neurology and Psychiatry, Kodaira, Tokyo 187-8553, Japan.
Hiroshi KadotaniDepartment of Psychiatry, Shiga University of Medical Science, Otsu, Shiga 520-2192, Japan.
Makoto UchiyamaDepartment of Psychiatry, Nihon University School of Medicine, Itabashi, Tokyo 173-8610, Japan.
Takashi EbisawaDepartment of Psychiatry, Tokyo Metropolitan Police Hospital, Nakano, Tokyo 164-8541, Japan.
Yuichi Inoue1] Department of Somnology, Tokyo Medical University, Shinjuku, Tokyo 160-8402, Japan [2] Yoyogi Sleep Disorder Center, Shibuya, Tokyo 151-0053, Japan.
Yuichi KameiDepartment of Laboratory Medicine, National Center Hospital, National Center of Neurology and Psychiatry, Kodaira, Tokyo 187-8551, Japan.
Masako OkawaJapan Foundation for Neuroscience and Mental Health, Kodaira, Tokyo 187-8551, Japan.
Kiyohisa TakahashiJapan Foundation for Neuroscience and Mental Health, Kodaira, Tokyo 187-8551, Japan.
Kazuo MishimaDepartment of Psychophysiology, National Institute of Mental Health, National Center of Neurology and Psychiatry, Kodaira, Tokyo 187-8553, Japan.
National Center of Neurology and Psychiatry · JPNational Institute of Mental Health · JPNihon University · JPShiga University of Medical Science · JPTokyo Medical University · JPTokyo Metropolitan Police Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A system of self-sustained biological clocks controls the 24-h rhythms of behavioral and physiological processes such as the sleep-wake cycle. The circadian clock system is regulated by transcriptional and translational negative feedback loops of multiple clock genes. Polymorphisms in circadian clock genes have been associated with morningness-eveningness (diurnal) preference, familial advanced sleep phase type (ASPT), and delayed sleep phase type (DSPT). We genotyped single-nucleotide polymorphisms in circadian clock genes in 182 DSPT individuals, 67 free-running type (FRT) individuals, and 925 controls. The clock gene polymorphisms were tested for associations with diurnal preference and circadian rhythm sleep disorder (CRSD) phenotypes. The PER3 polymorphism (rs228697) was significantly associated with diurnal preference and the FRT phenotype. The minor allele of rs228697 was more prevalent in evening types than in morning types (sex-adjusted odds ratio (OR), 2.483, Bonferroni-corrected P = 0.012) and in FRT individuals compared with the controls (age- and sex-adjusted OR, 2.021, permutated P = 0.017). Our findings support the notion that PER3 polymorphisms could be a potential genetic marker for an individual's circadian and sleep phenotypes.

Indexed as

AdultAllelesARNTL Transcription FactorsCasein Kinase ICell Cycle ProteinsCircadian ClocksCircadian RhythmCLOCK ProteinsCryptochromesFemaleGene FrequencyGenetic MarkersGenetic Predisposition to DiseaseHumansIntracellular Signaling Peptides and ProteinsMaleARNTL Transcription FactorsBMAL1 protein, humanCasein Kinase ICell Cycle ProteinsCLOCK protein, humanCLOCK ProteinsCRY1 protein, humanCryptochromesGenetic MarkersIntracellular Signaling Peptides and ProteinsPER1 protein, humanPER3 protein, humanPeriod Circadian ProteinsTIMELESS protein, human

Identifiers

PMID25201053
PMCPMC4158573
OpenAlexW2040388348

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.