Evidence map›Paper›PMID 25197329›Full record

ArticleInternational journal of clinical and experimental pathology2014

A guide to histomorphological evaluation of intestinal inflammation in mouse models.

Ulrike Erben, Christoph Loddenkemper, Katja Doerfel, Simone Spieckermann, Dirk Haller, Markus M Heimesaat, Martin Zeitz, Britta Siegmund, Anja A Kühl

Abstract read
In one paragraph

Article in International journal of clinical and experimental pathology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 575 papers.

0numbers the graph read from it
0cells of the map it votes in
575citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

575 citing papers in PubMed.

  1. Oral delivery of recombinantDrug delivery · 2026
    Article
  2. Article
  3. Pathological and morphometric characterization of intestinal lesions associated with natural infection byInternational journal for parasitology. Parasites and wildlife · 2026
    Article
  4. Article
  5. Article
  6. Review
  7. Colonic metabolomic and transcriptomic alterations in a mouse model of metabolic syndrome.American journal of physiology. Gastrointestinal and liver physiology · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. iScience · 2026
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

515 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ulrike ErbenDepartment of Medicine I for Gastroenterology, Infectious Disease and Rheumatology, Campus Benjamin Franklin, Charité-Universitätsmedizin Berlin Berlin, Germany ; Research Center ImmunoSciences, Charité-Universitätsmedizin Berlin Berlin, Germany.
Christoph LoddenkemperPathotres Joint Practice for Pathology Berlin, Germany.
Katja DoerfelCold Spring Harbor Laboratory New York, USA.
Simone SpieckermannDepartment of Medicine I for Gastroenterology, Infectious Disease and Rheumatology, Campus Benjamin Franklin, Charité-Universitätsmedizin Berlin Berlin, Germany ; Research Center ImmunoSciences, Charité-Universitätsmedizin Berlin Berlin, Germany.
Dirk HallerResearch Centre for Nutrition and Food Sciences, Biofunctionality Unit (ZIEL), Technical University Munich Freising-Weihenstephan, Germany.
Markus M HeimesaatInstitute for Microbiology and Infectious Medicine, Campus Benjamin Franklin, Charité-Universitätsmedizin Berlin Berlin, Germany.
Martin ZeitzDepartment of Medicine I for Gastroenterology, Infectious Disease and Rheumatology, Campus Benjamin Franklin, Charité-Universitätsmedizin Berlin Berlin, Germany.
Britta SiegmundDepartment of Medicine I for Gastroenterology, Infectious Disease and Rheumatology, Campus Benjamin Franklin, Charité-Universitätsmedizin Berlin Berlin, Germany ; Research Center ImmunoSciences, Charité-Universitätsmedizin Berlin Berlin, Germany.
Anja A KühlDepartment of Medicine I for Gastroenterology, Infectious Disease and Rheumatology, Campus Benjamin Franklin, Charité-Universitätsmedizin Berlin Berlin, Germany ; Research Center ImmunoSciences, Charité-Universitätsmedizin Berlin Berlin, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Histomorphology remains a powerful routine evaluating intestinal inflammation in animal models. Emphasizing the focus of a given animal study, histopathology can overstate differences between established models. We aimed to systematize histopathological evaluation of intestinal inflammation in mouse models facilitating inter-study comparisons. Samples of all parts of the intestinal tract from well-established mouse models of intestinal inflammation were evaluated from hematoxylin/eosin-stained sections and specific observations confirmed by subsequent immunohistochemistry. Three main categories sufficiently reflected the severity of histopathology independent of the localization and the overall extent of an inflammation: (i) quality and dimension of inflammatory cell infiltrates, (ii) epithelial changes and (iii) overall mucosal architecture. Scoring schemata were defined along specified criteria for each of the three categories. The direction of the initial hit proved crucial for the comparability of histological changes. Chemical noxes, infection with intestinal parasites or other models where the barrier was disturbed from outside, the luminal side, showed high levels of similarity and distinct differences to changes in the intestinal balance resulting from inside events like altered cytokine responses or disruption of the immune cell homeostasis. With a high degree of generalisation and maximum scores from 4-8 suitable scoring schemata accounted specific histopathological hallmarks. Truly integrating demands and experiences of gastroenterologists, mouse researchers, microbiologists and pathologists we provide an easy-to-use guideline evaluating histomorphology in mouse models of intestinal inflammation. Standard criteria and definitions facilitate classification and rating of new relevant models, allow comparison in animal studies and transfer of functional findings to comparable histopathologies in human disease.

Indexed as

Disease Models, AnimalAnimalsHumansImmunohistochemistryInflammatory Bowel DiseasesMiceHistopathologyinflammationinflammatory bowel diseasemouse modelsscoring

Identifiers

PMID25197329
PMCPMC4152019

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.