Evidence map›Paper›PMID 25197074›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Structural insight into the molecular mechanism of allosteric activation of human cystathionine β-synthase by S-adenosylmethionine.

June Ereño-Orbea, Tomas Majtan, Iker Oyenarte, Jan P Kraus, Luis Alfonso Martínez-Cruz

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 104 citations in OpenAlex.

  1. Association of Cystathionine β-Synthase Gene Polymorphisms With Preeclampsia.Clinical and applied thrombosis/hemostasis : official journal of the International Academy of Clinical and Applied Thrombosis/Hemostasis · 2018
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  17. HCellular and molecular life sciences : CMLS · 2022
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  19. Science advances · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

June Ereño-OrbeaStructural Biology Unit, Center for Cooperative Research in Biosciences (CIC bioGUNE), Technology Park of Bizkaia, 48160 Derio, Spain; and.
Tomas MajtanDepartment of Pediatrics, University of Colorado School of Medicine, Aurora, CO 80045.
Iker OyenarteStructural Biology Unit, Center for Cooperative Research in Biosciences (CIC bioGUNE), Technology Park of Bizkaia, 48160 Derio, Spain; and.
Jan P KrausDepartment of Pediatrics, University of Colorado School of Medicine, Aurora, CO 80045 Jan.Kraus@ucdenver.edu amartinez@cicbiogune.es.
Luis Alfonso Martínez-CruzStructural Biology Unit, Center for Cooperative Research in Biosciences (CIC bioGUNE), Technology Park of Bizkaia, 48160 Derio, Spain; and Jan.Kraus@ucdenver.edu amartinez@cicbiogune.es.
CIC bioGUNE · ESUniversity of Colorado Denver · US

Funding

HOMOCYSTEINE, NITRIC OXIDE AND HEME: ROLE IN THROMBOSISR01HL065217 · NHLBI · UNIVERSITY OF WISCONSIN MADISON · PI BURSTYN, JUDITH N, KRAUS, JAN P. · 2000 to 2012
$3.1M
NHLBI NIH HHS HL065217NHLBI NIH HHS R01 HL065217
6 · The paper itself

Abstract

Cystathionine β-synthase (CBS) is a heme-dependent and pyridoxal-5'-phosphate-dependent protein that controls the flux of sulfur from methionine to cysteine, a precursor of glutathione, taurine, and H2S. Deficiency of CBS activity causes homocystinuria, the most frequent disorder of sulfur amino acid metabolism. In contrast to CBSs from lower organisms, human CBS (hCBS) is allosterically activated by S-adenosylmethionine (AdoMet), which binds to the regulatory domain and triggers a conformational change that allows the protein to progress from the basal toward the activated state. The structural basis of the underlying molecular mechanism has remained elusive so far. Here, we present the structure of hCBS with bound AdoMet, revealing the activated conformation of the human enzyme. Binding of AdoMet triggers a conformational change in the Bateman module of the regulatory domain that favors its association with a Bateman module of the complementary subunit to form an antiparallel CBS module. Such an arrangement is very similar to that found in the constitutively activated insect CBS. In the presence of AdoMet, the autoinhibition exerted by the regulatory region is eliminated, allowing for improved access of substrates to the catalytic pocket. Based on the availability of both the basal and the activated structures, we discuss the mechanism of hCBS activation by AdoMet and the properties of the AdoMet binding site, as well as the responsiveness of the enzyme to its allosteric regulator. The structure described herein paves the way for the rational design of compounds modulating hCBS activity and thus transsulfuration, redox status, and H2S biogenesis.

Indexed as

Allosteric RegulationAmino Acid SequenceBinding SitesCrystallography, X-RayCystathionine beta-SynthaseEnzyme ActivationEnzyme StabilityHumansModels, MolecularMolecular Sequence DataMutationProtein Interaction Domains and MotifsProtein Interaction MappingProtein Structure, SecondaryS-AdenosylmethionineCystathionine beta-SynthaseS-AdenosylmethionineCBS domainhydrogen sulfide

Identifiers

PMID25197074
PMCPMC4169959
OpenAlexW2080044106

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.