Evidence map›Paper›PMID 25197070›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Noncanonical SMC protein in Mycobacterium smegmatis restricts maintenance of Mycobacterium fortuitum plasmids.

Michael W Panas, Paras Jain, Hui Yang, Shimontini Mitra, Debasis Biswas, Alice Rebecca Wattam, Norman L Letvin, William R Jacobs

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 70 citations in OpenAlex.

  1. UsingACS synthetic biology · 2025
    Article
  2. Article
  3. Article
  4. The extended mobility of plasmids.Nucleic acids research · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. SMC-based immunity against extrachromosomal DNA elements.Biochemical Society transactions · 2023
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. A Comparative Analysis ofInternational journal of molecular sciences · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 2 countries.

Michael W PanasDivision of Viral Pathogenesis, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA 02115;
Paras JainHoward Hughes Medical Institute and Department of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, NY 10461;
Hui YangDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, NY 10461;
Shimontini MitraDivision of Viral Pathogenesis, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA 02115;
Debasis BiswasDepartment of Microbiology, Himalayan Institute of Medical Sciences, Swami Ram Nagar, Jolly Grant, Dehradun 248140, India; and.
Alice Rebecca WattamVirginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24061.
Norman L LetvinDivision of Viral Pathogenesis, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA 02115;
William R JacobsHoward Hughes Medical Institute and Department of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, NY 10461; william.jacobs@einstein.yu.edu.
Albert Einstein College of Medicine · USBeth Israel Deaconess Medical Center · USHarvard University · USHoward Hughes Medical Institute · USSwami Rama Himalayan University · INVirginia Tech · US

Funding

"The Tuberculous Granuloma"P01AI063537 · NIAID · ALBERT EINSTEIN COL OF MED YESHIVA UNIV · PI CHAN, JOHN R. · 2005 to 2015
$15.7M
Molecular Genetic Analysis of Mycobacterium TuberculosisR37AI026170 · NIAID · ALBERT EINSTEIN COL OF MED YESHIVA UNIV · PI WILLIAM Robert JACOBS · 2004 to 2026
$7.7M
MOLECULAR GENETIC ANALYSIS OF MYCOBACTERIUM TUBERCULOSISR01AI026170 · NIAID · YESHIVA UNIVERSITY · PI JACOBS, WILLIAM ROBERT · 1989 to 2022
$7.1M
Vaccines for Extensively Drug Resistant TuberculosisR01AI098925 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI JACOBS, WILLIAM ROBERT · 2012 to 2016
$5.8M
Novel Drug Discovery against P. falciparum ENRP01AI060342 · NIAID · TEXAS A&M AGRILIFE RESEARCH · PI SACCHETTINI, JAMES C · 2004 to 2008
$3.9M
Reporter Phages for Diagnosis of Drug-Resistant TB in HIV High-Burden PopulationsR56AI106543 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI JACOBS, WILLIAM ROBERT · 2013 to 2013
$514k
MOLECULAR GENETIC ANALYSIS OF MYCOBACTERIUM TUBERCULOSISR22AI026170 · NIAID · YESHIVA UNIVERSITY · PI JACOBS, WILLIAM ROBERT · 1989 to 1991
–
Howard Hughes Medical InstituteNIAID NIH HHS AI106543-01NIAID NIH HHS AI26170NIAID NIH HHS P01 AI060342NIAID NIH HHS P01 AI063537NIAID NIH HHS R01 AI026170NIAID NIH HHS R01 AI098925NIAID NIH HHS R37 AI026170NIAID NIH HHS R56 AI106543PHS HHS HSN272200900040C
6 · The paper itself

Abstract

Research on tuberculosis and leprosy was revolutionized by the development of a plasmid transformation system in the fast-growing surrogate, Mycobacterium smegmatis. This transformation system was made possible by the successful isolation of a M. smegmatis mutant strain mc(2)155, whose efficient plasmid transformation (ept) phenotype supported the replication of Mycobacterium fortuitum pAL5000 plasmids. In this report, we identified the EptC gene, the loss of which confers the ept phenotype. EptC shares significant amino acid sequence homology and domain structure with the MukB protein of Escherichia coli, a structural maintenance of chromosomes (SMC) protein. Surprisingly, M. smegmatis has three paralogs of SMC proteins: EptC and MSMEG_0370 both share homology with Gram-negative bacterial MukB; and MSMEG_2423 shares homology with Gram-positive bacterial SMCs, including the single SMC protein predicted for Mycobacterium tuberculosis and Mycobacterium leprae. Purified EptC was shown to bind ssDNA and stabilize negative supercoils in plasmid DNA. Moreover, an EptC-mCherry fusion protein was constructed and shown to bind to DNA in live mycobacteria, and to prevent segregation of plasmid DNA to daughter cells. To our knowledge, this is the first report of impaired plasmid maintenance caused by a SMC homolog, which has been canonically known to assist the segregation of genetic materials.

Indexed as

Bacterial ProteinsBase SequenceComputational BiologyGene DeletionGenes, BacterialMolecular Sequence DataMutationMycobacterium fortuitumMycobacterium smegmatisPhenotypePlasmidsSequence Homology, Amino AcidTransformation, GeneticBacterial Proteinscell divisionDNA topologyelectroporationpartition errorsplasmid segregation

Identifiers

PMID25197070
PMCPMC4169951
OpenAlexW1989477034

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.