Evidence map›Paper›PMID 25197060›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

A TNFSF15 disease-risk polymorphism increases pattern-recognition receptor-induced signaling through caspase-8-induced IL-1.

Matija Hedl, Clara Abraham

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
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  11. Employing in silico investigations to determine the cross-kingdom approach forBeni-Suef University journal of basic and applied sciences · 2023
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  17. Utilising Network Pharmacology to Explore Underlying Mechanism ofEvidence-based complementary and alternative medicine : eCAM · 2022
    Article
  18. Article
  19. Article
  20. The E3 ubiquitin ligase RNF186 andProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Matija HedlDepartment of Internal Medicine, Yale University, New Haven, CT 06510.
Clara AbrahamDepartment of Internal Medicine, Yale University, New Haven, CT 06510 clara.abraham@yale.edu.
Yale University · US

Funding

Yale Liver CenterP30DK034989 · NIDDK · YALE UNIVERSITY · PI WAJAHAT Zafar MEHAL · 1986 to 2026
$31.1M
Yale University Inflammatory Bowel Disease Genetics Research CenterU01DK062422 · NIDDK · YALE UNIVERSITY · PI Ling-shiang Chuang · 2002 to 2026
$10.8M
Functional outcomes of inflammatory bowel disease associated variantsR01DK099097 · NIDDK · YALE UNIVERSITY · PI CLARA ABRAHAM · 2013 to 2026
$7.0M
Yale Autoimmunity Center of ExcellenceU19AI082713 · NIAID · YALE UNIVERSITY · PI HEROLD, KEVAN C · 2009 to 2013
$3.6M
Mechanisms of Chronic Nod2-mediated Effects in Human MacrophagesR01DK077905 · NIDDK · YALE UNIVERSITY · PI ABRAHAM, CLARA · 2008 to 2012
$1.7M
IL-23/Th17 pathways and Inflammatory Bowel DiseaseR56AI089789 · NIAID · YALE UNIVERSITY · PI ABRAHAM, CLARA · 2012 to 2012
$415k
Susceptibility of antigen-specific CD4 T cells to HIV: implications for HIV vacciR21AI110214 · NIAID · UNIVERSITY OF TEXAS MED BR GALVESTON · PI HU, HAITAO · 2014 to 2015
$403k
NIAID NIH HHS 1R21AI110214NIAID NIH HHS R56 AI089789NIAID NIH HHS R56AI089789NIAID NIH HHS U19 AI082713NIAID NIH HHS U19-AI082713NIDDK NIH HHS DK062422NIDDK NIH HHS DK-P30-34989NIDDK NIH HHS P30 DK034989NIDDK NIH HHS R01 DK077905NIDDK NIH HHS R01DK077905NIDDK NIH HHS R01 DK099097NIDDK NIH HHS U01 DK062422
6 · The paper itself

Abstract

Inflammatory diseases are characterized by dysregulated cytokine production. Altered functions for most risk loci, including the inflammatory bowel disease and leprosy-associated tumor necrosis factor ligand superfamily member 15 (TNFSF15) region, are unclear. Regulation of pattern-recognition-receptor (PRR)-induced signaling and cytokines is crucial for immune homeostasis; TNFSF15:death receptor 3 (DR3) contributions to PRR responses have not been described. We found that human macrophages expressed DR3 and that TNFSF15:DR3 interactions were critical for amplifying PRR-initiated MAPK/NF-κB/PI3K signaling and cytokine secretion in macrophages. Mechanisms mediating TNFSF15:DR3 contributions to PRR outcomes included TACE-induced TNFSF15 cleavage to soluble TNFSF15; soluble TNFSF15 then led to TRADD/FADD/MALT-1- and caspase-8-mediated autocrine IL-1 secretion. Notably, TNFSF15 treatment also induced cytokine secretion through a caspase-8-dependent pathway in intestinal myeloid cells. Importantly, rs6478108 A disease risk-carrier macrophages demonstrated increased TNFSF15 expression and PRR-induced signaling and cytokines. Taken together, TNFSF15:DR3 interactions amplify PRR-induced signaling and cytokines, and the rs6478108 TNFSF15 disease-risk polymorphism results in a gain of function.

Indexed as

Genetic Predisposition to DiseaseSignal TransductionAcetylmuramyl-Alanyl-IsoglutamineADAM17 ProteinADAM ProteinsCaspase 8Cells, CulturedHumansInterleukin-1LigandsMacrophagesMitogen-Activated Protein KinasesMycobacteriumMyeloid CellsNF-kappa BNod2 Signaling Adaptor ProteinAcetylmuramyl-Alanyl-IsoglutamineADAM17 ProteinADAM17 protein, humanADAM ProteinsCaspase 8Interleukin-1LigandsMitogen-Activated Protein KinasesNF-kappa BNOD2 protein, humanNod2 Signaling Adaptor ProteinPhosphatidylinositol 3-KinasesReceptors, Pattern RecognitionReceptors, Tumor Necrosis Factor, Member 25Tissue Inhibitor of Metalloproteinase-3TNFRSF25 protein, humanTNFSF15 protein, humanTumor Necrosis Factor Ligand Superfamily Member 15Crohn diseasegeneticsNOD2TLRulcerative colitis

Identifiers

PMID25197060
PMCPMC4169936
OpenAlexW2034099558

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.