Evidence map›Paper›PMID 25196714›Full record

ArticleNMR in biomedicine2014

Automated whole-brain N-acetylaspartate proton MRS quantification.

Brian J Soher, William E Wu, Assaf Tal, Pippa Storey, Ke Zhang, James S Babb, Ivan I Kirov, Yvonne W Lui, Oded Gonen

Abstract read
In one paragraph

Article in NMR in biomedicine, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. The Emerging Role of N-Acetylaspartate in Cancer.International journal of molecular sciences · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Brian J SoherDepartment of Radiology, Duke University Medical Center, Durham, NC, 27710, USA.
William E Wu
Assaf Tal
Pippa Storey
Ke Zhang
James S Babb
Ivan I Kirov
Yvonne W Lui
Oded Gonen
New York University · USDuke Medical Center · USWeizmann Institute of Science · IL

Funding

PSYCHOSOCIAL COREP30AG008051 · NIA · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI SHAO, YONGZHAO · 1990 to 2019
$36.1M
QUANTITATIVE MRI AND 1H-MRS IN TRAUMATIC BRAIN INJURYR01NS039135 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI LUI, YVONNE W · 2000 to 2017
$10.1M
HIGHER SPEED, FIELD &SPATIAL RESOLUTION BRAIN 3D 1H MRSR01EB001015 · NIBIB · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI GONEN, ODED · 2002 to 2011
$5.8M
Serial Brain 3D 1H MR Spectroscopy in Multiple SclerosisR01NS050520 · NINDS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI GONEN, ODED · 2005 to 2009
$2.9M
MrSPA: Integrated tools and development platform for magnetic resonance researchR01EB008387 · NIBIB · DUKE UNIVERSITY · PI SOHER, BRIAN J, YOUNG, KARL A · 2008 to 2010
$1.2M
Serial Brain 3D 1H MR Spectroscopy in Multiple Sclerosis.R56NS050520 · NINDS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI GONEN, ODED · 2011 to 2011
$586k
NIA NIH HHS P30 AG008051NIBIB NIH HHS EB008387NIBIB NIH HHS EB01015NIBIB NIH HHS R01 EB001015NIBIB NIH HHS R01 EB008387NINDS NIH HHS NS050520NINDS NIH HHS R01 NS039135NINDS NIH HHS R01 NS050520NINDS NIH HHS R56 NS050520
6 · The paper itself

Abstract

Concentration of the neuronal marker, N-acetylaspartate (NAA), a quantitative metric for the health and density of neurons, is currently obtained by integration of the manually defined peak in whole-head proton ((1) H)-MRS. Our goal was to develop a full spectral modeling approach for the automatic estimation of the whole-brain NAA concentration (WBNAA) and to compare the performance of this approach with a manual frequency-range peak integration approach previously employed. MRI and whole-head (1) H-MRS from 18 healthy young adults were examined. Non-localized, whole-head (1) H-MRS obtained at 3 T yielded the NAA peak area through both manually defined frequency-range integration and the new, full spectral simulation. The NAA peak area was converted into an absolute amount with phantom replacement and normalized for brain volume (segmented from T1 -weighted MRI) to yield WBNAA. A paired-sample t test was used to compare the means of the WBNAA paradigms and a likelihood ratio test used to compare their coefficients of variation. While the between-subject WBNAA means were nearly identical (12.8 ± 2.5 mm for integration, 12.8 ± 1.4 mm for spectral modeling), the latter's standard deviation was significantly smaller (by ~50%, p = 0.026). The within-subject variability was 11.7% (±1.3 mm) for integration versus 7.0% (±0.8 mm) for spectral modeling, i.e., a 40% improvement. The (quantifiable) quality of the modeling approach was high, as reflected by Cramer-Rao lower bounds below 0.1% and vanishingly small (experimental - fitted) residuals. Modeling of the whole-head (1) H-MRS increases WBNAA quantification reliability by reducing its variability, its susceptibility to operator bias and baseline roll, and by providing quality-control feedback. Together, these enhance the usefulness of the technique for monitoring the diffuse progression and treatment response of neurological disorders.

Indexed as

Brain ChemistryAdultAspartic AcidAutomationBrainComputer SimulationFemaleHumansMaleNeuronsOrgan SizePhantoms, ImagingProton Magnetic Resonance SpectroscopyProtonsReference ValuesAspartic AcidN-acetylaspartateProtonsMRI segmentationMRS quantificationN-acetylaspartate (NAA)whole-brain NAA concentration (WBNAA)

Identifiers

PMID25196714
PMCPMC4212831
OpenAlexW2117447912

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.