Evidence map›Paper›PMID 25194890›Full record

ArticleJournal of virological methods2014

FMDV replicons encoding green fluorescent protein are replication competent.

Fiona Tulloch, Uday Pathania, Garry A Luke, John Nicholson, Nicola J Stonehouse, David J Rowlands, Terry Jackson, Toby Tuthill, Juergen Haas, Angus I Lamond and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of virological methods, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Viral Replicon Systems and Their Biosafety Aspects.Applied biosafety : journal of the American Biological Safety Association · 2023
    Review
  8. Article
  9. Article
  10. The Multi-Faceted Role of Autophagy During Animal Virus Infection.Frontiers in cellular and infection microbiology · 2022
    Review
  11. Article
  12. Article
  13. Functional advantages of triplication of the 3B coding region of the FMDV genome.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2021
    Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Fiona TullochCentre for Biomolecular Sciences, School of Biology, University of St Andrews, North Haugh, St Andrews KY16 9ST, UK. Electronic address: fat3@st-andrews.ac.uk.
Uday PathaniaCentre for Biomolecular Sciences, School of Biology, University of St Andrews, North Haugh, St Andrews KY16 9ST, UK. Electronic address: udaysinghpathania3989@googlemail.com.
Garry A LukeCentre for Biomolecular Sciences, School of Biology, University of St Andrews, North Haugh, St Andrews KY16 9ST, UK. Electronic address: garryluke@hotmail.com.
John NicholsonCentre for Biomolecular Sciences, School of Biology, University of St Andrews, North Haugh, St Andrews KY16 9ST, UK. Electronic address: jn@st-andrews.ac.uk.
Nicola J StonehouseSchool of Molecular and Cellular Biology, Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, UK. Electronic address: N.J.Stonehouse@leeds.ac.uk.
David J RowlandsSchool of Molecular and Cellular Biology, Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, UK. Electronic address: D.J.Rowlands@leeds.ac.uk.
Terry JacksonThe Pirbright Institute, Ash Road, Pirbright, Surrey GU24 ONF, UK. Electronic address: terry.jackson@pirbright.ac.uk.
Toby TuthillThe Pirbright Institute, Ash Road, Pirbright, Surrey GU24 ONF, UK. Electronic address: toby.tuthill@pirbright.ac.uk.
Juergen HaasDivision of Pathway Medicine, University of Edinburgh, 49 Little France Crescent, Edinburgh EH16 4SB, UK. Electronic address: juergen.haas@ed.ac.uk.
Angus I LamondCentre for Gene Regulation and Expression, College of Life Sciences, University of Dundee, DD1 5EH, UK. Electronic address: a.i.lamond@dundee.ac.uk.
Martin D RyanCentre for Biomolecular Sciences, School of Biology, University of St Andrews, North Haugh, St Andrews KY16 9ST, UK. Electronic address: martin.ryan@st-and.ac.uk.
University of St Andrews · GBThe Pirbright Institute · GBUniversity of Leeds · GBUniversity of Dundee · GBUniversity of Edinburgh · GB

Funding

Biotechnology and Biological Sciences Research Council BB/E010709/1Biotechnology and Biological Sciences Research Council BB/E014321/1Biotechnology and Biological Sciences Research Council BB/H007849/1Biotechnology and Biological Sciences Research Council BB/K003801/1Biotechnology and Biological Sciences Research Council BBS/E/I/00001411Biotechnology and Biological Sciences Research Council C20035Medical Research Council G0901002Wellcome Trust 073980Wellcome Trust 089209/Z/09/ZWellcome Trust 097945
6 · The paper itself

Abstract

The study of replication of viruses that require high bio-secure facilities can be accomplished with less stringent containment using non-infectious 'replicon' systems. The FMDV replicon system (pT7rep) reported by Mclnerney et al. (2000) was modified by the replacement of sequences encoding chloramphenicol acetyl-transferase (CAT) with those encoding a functional L proteinase (L(pro)) linked to a bi-functional fluorescent/antibiotic resistance fusion protein (green fluorescent protein/puromycin resistance, [GFP-PAC]). Cells were transfected with replicon-derived transcript RNA and GFP fluorescence quantified. Replication of transcript RNAs was readily detected by fluorescence, whilst the signal from replication-incompetent forms of the genome was >2-fold lower. Surprisingly, a form of the replicon lacking the L(pro) showed a significantly stronger fluorescence signal, but appeared with slightly delayed kinetics. Replication can, therefore, be quantified simply by live-cell imaging and image analyses, providing a rapid and facile alternative to RT-qPCR or CAT assays.

Indexed as

Virus ReplicationAnimalsChloramphenicol O-AcetyltransferaseFluorescenceFoot-and-Mouth Disease VirusGreen Fluorescent ProteinsMolecular BiologyRecombinant ProteinsStaining and LabelingVirologyChloramphenicol O-AcetyltransferaseGreen Fluorescent ProteinsRecombinant ProteinsFluorescenceFMDVReplicationReplicon

Identifiers

PMID25194890
PMCPMC4201441
OpenAlexW2149258337

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.