Evidence map›Paper›PMID 25194028›Full record

ArticleThe Plant cell2014

MYB118 represses endosperm maturation in seeds of Arabidopsis.

Guillaume Barthole, Alexandra To, Chloé Marchive, Véronique Brunaud, Ludivine Soubigou-Taconnat, Nathalie Berger, Bertrand Dubreucq, Loïc Lepiniec, Sébastien Baud

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
7.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 84 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Guillaume BartholeINRA, UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France AgroParisTech, UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France.
Alexandra ToINRA, UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France AgroParisTech, UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France.
Chloé MarchiveINRA, UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France AgroParisTech, UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France.
Véronique BrunaudINRA, Unité de Recherche en Génomique Végétale, Génomique Fonctionnelle d'Arabidopsis, Plateforme Transcriptome, UMR1165, INRA-Université d'Evry Val d'Essonne, ERL8196 CNRS, Saclay Plant Sciences, F-91000 Evry, France.
Ludivine Soubigou-TaconnatINRA, Unité de Recherche en Génomique Végétale, Génomique Fonctionnelle d'Arabidopsis, Plateforme Transcriptome, UMR1165, INRA-Université d'Evry Val d'Essonne, ERL8196 CNRS, Saclay Plant Sciences, F-91000 Evry, France.
Nathalie BergerINRA, UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France AgroParisTech, UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France.
Bertrand DubreucqINRA, UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France AgroParisTech, UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France.
Loïc LepiniecINRA, UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France AgroParisTech, UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France.
Sébastien BaudINRA, UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France AgroParisTech, UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France sebastien.baud@versailles.inra.fr.
Institut National de la Recherche Agronomique · MAAgroParisTech · FRCentre National de la Recherche Scientifique · FRUniversité d'Évry Val-d'Essonne · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the exalbuminous species Arabidopsis thaliana, seed maturation is accompanied by the deposition of oil and storage proteins and the reduction of the endosperm to one cell layer. Here, we consider reserve partitioning between embryo and endosperm compartments. The pattern of deposition, final amount, and composition of these reserves differ between the two compartments, with the embryo representing the principal storage tissue in mature seeds. Complex regulatory mechanisms are known to prevent activation of maturation-related programs during embryo morphogenesis and, later, during vegetative growth. Here, we describe a regulator that represses the expression of maturation-related genes during maturation within the endosperm. MYB118 is transcriptionally induced in the maturing endosperm, and seeds of myb118 mutants exhibit an endosperm-specific derepression of maturation-related genes associated with a partial relocation of storage compounds from the embryo to the endosperm. Moreover, MYB118 activates endosperm-induced genes through the recognition of TAACGG elements. These results demonstrate that the differential partitioning of reserves between the embryo and endosperm in exalbuminous Arabidopsis seeds does not only result from developmental programs that establish the embryo as the preponderant tissue within seeds. This differential partitioning is also regulated by MYB118, which regulates the biosynthesis of reserves at the spatial level during maturation.

Indexed as

ArabidopsisArabidopsis ProteinsBase SequenceEndospermGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGenes, PlantMolecular Sequence DataMutationProtein BindingTranscriptional ActivationTranscription FactorsArabidopsis ProteinsMYB118 protein, ArabidopsisTranscription Factors

Identifiers

PMID25194028
PMCPMC4213162
OpenAlexW1983922522

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.