Evidence map›Paper›PMID 25192977›Full record

ArticleThe Journal of membrane biology2014

High-resolution structure of a membrane protein transferred from amphipol to a lipidic mesophase.

V Polovinkin, I Gushchin, M Sintsov, E Round, T Balandin, P Chervakov, V Shevchenko, P Utrobin, A Popov, V Borshchevskiy and 6 more

Erratum issuedAbstract read
PubMed Publisher
In one paragraph

Article in The Journal of membrane biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 41 citations in OpenAlex.

  1. Review
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  13. Membrane proteins, detergents and crystals: what is the state of the art?Acta crystallographica. Section F, Structural biology communications · 2014
    Review
  14. Amphipols for each season.The Journal of membrane biology · 2014
    Review
  15. Review
  16. Article
  17. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 8 institutions in 3 countries.

V PolovinkinUniv. Grenoble Alpes, IBS, 38044, Grenoble, France.
I Gushchin
M Sintsov
E Round
T Balandin
P Chervakov
V Shevchenko
P Utrobin
A Popov
V Borshchevskiy
A Mishin
A Kuklin
D Willbold
V Chupin
J-L Popot
V Gordeliy
Forschungszentrum Jülich · DEMoscow Institute of Physics and Technology · RUInstitut de Biologie Structurale · FRUniversité Grenoble Alpes · FRCentre National de la Recherche Scientifique · FREuropean Synchrotron Radiation Facility · FRHeinrich Heine University Düsseldorf · DEJoint Institute for Nuclear Research · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Amphipols (APols) have become important tools for the stabilization, folding, and in vitro structural and functional studies of membrane proteins (MPs). Direct crystallization of MPs solubilized in APols would be of high importance for structural biology. However, despite considerable efforts, it is still not clear whether MP/APol complexes can form well-ordered crystals suitable for X-ray crystallography. In the present work, we show that an APol-trapped MP can be crystallized in meso. Bacteriorhodopsin (BR) trapped by APol A8-35 was mixed with a lipidic mesophase, and crystallization was induced by adding a precipitant. The crystals diffract beyond 2 Å. The structure of BR was solved to 2 Å and found to be indistinguishable from previous structures obtained after transfer from detergent solutions. We suggest the proposed protocol of in meso crystallization to be generally applicable to APol-trapped MPs.

Indexed as

BacteriorhodopsinsCrystallizationHydrophobic and Hydrophilic InteractionsLipid BilayersMembrane ProteinsPolymersPropylaminesProtein ConformationSolubilitySolutionsSurface-Active Agentsamphipol A8-35BacteriorhodopsinsLipid BilayersMembrane ProteinsPolymersPropylaminesSolutionsSurface-Active Agents

Identifiers

PMID25192977
OpenAlexW2153732237

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.