Evidence map›Paper›PMID 25192697›Full record

ArticlePlant physiology2014

Broad 4-hydroxyphenylpyruvate dioxygenase inhibitor herbicide tolerance in soybean with an optimized enzyme and expression cassette.

Daniel L Siehl, Yumin Tao, Henrik Albert, Yuxia Dong, Matthew Heckert, Alfredo Madrigal, Brishette Lincoln-Cabatu, Jian Lu, Tamara Fenwick, Ericka Bermudez and 14 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 81 citations in OpenAlex.

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  20. Combination of Virtual Screening Protocol byFrontiers in chemistry · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 3 institutions in 1 country.

Daniel L SiehlDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.) dan.siehl@pioneer.com.
Yumin TaoDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Henrik AlbertDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Yuxia DongDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Matthew HeckertDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Alfredo MadrigalDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Brishette Lincoln-CabatuDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Jian LuDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Tamara FenwickDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Ericka BermudezDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Marian SandovalDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Caroline HornDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Jerry M GreenDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Theresa HaleDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Peggy PaganoDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Jenna ClarkDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Ingrid A UdranszkyDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Nancy RizzoDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Timothy BourettDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Richard J HowardDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
David H JohnsonDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Mark VogtDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Goke AkinsolaDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Linda A CastleDuPont Pioneer, Hayward, California 94545 (D.L.S., Y.T., H.A., Y.D., M.H., A.M., B.L.-C., J.L., T.F., E.B., M.S., C.H., I.A.U., L.A.C.);DuPont Stein-Haskell Research Center, Newark, Delaware 19711 (J.M.G., T.H., P.P., J.C.);DuPont Experimental Station, Wilmington, Delaware 19803 (N.R., T.B., R.J.H.); andDuPont Pioneer, Johnston, Iowa 50131 (D.H.J., M.V., G.A.).
Pioneer Hi-Bred · USDuPont (United States) · USExperimental Station · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

With an optimized expression cassette consisting of the soybean (Glycine max) native promoter modified for enhanced expression driving a chimeric gene coding for the soybean native amino-terminal 86 amino acids fused to an insensitive shuffled variant of maize (Zea mays) 4-hydroxyphenylpyruvate dioxygenase (HPPD), we achieved field tolerance in transgenic soybean plants to the HPPD-inhibiting herbicides mesotrione, isoxaflutole, and tembotrione. Directed evolution of maize HPPD was accomplished by progressively incorporating amino acids from naturally occurring diversity and novel substitutions identified by saturation mutagenesis, combined at random through shuffling. Localization of heterologously expressed HPPD mimicked that of the native enzyme, which was shown to be dually targeted to chloroplasts and the cytosol. Analysis of the native soybean HPPD gene revealed two transcription start sites, leading to transcripts encoding two HPPD polypeptides. The N-terminal region of the longer encoded peptide directs proteins to the chloroplast, while the short form remains in the cytosol. In contrast, maize HPPD was found almost exclusively in chloroplasts. Evolved HPPD enzymes showed insensitivity to five inhibitor herbicides. In 2013 field trials, transgenic soybean events made with optimized promoter and HPPD variant expression cassettes were tested with three herbicides and showed tolerance to four times the labeled rates of mesotrione and isoxaflutole and two times the labeled rates of tembotrione.

Indexed as

4-Hydroxyphenylpyruvate DioxygenaseAmino Acid SequenceCyclohexanonesGene ExpressionGlycine maxHerbicidesIsoxazolesMolecular Sequence DataPlant ProteinsPlants, Genetically ModifiedSequence Alignment4-Hydroxyphenylpyruvate DioxygenaseCyclohexanonesHerbicidesisoxaflutoleIsoxazolesPlant Proteins

Identifiers

PMID25192697
PMCPMC4226376
OpenAlexW2054577537

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.