Evidence map›Paper›PMID 25191307›Full record

ArticleFrontiers in microbiology2014

Winter bloom of a rare betaproteobacterium in the Arctic Ocean.

Laura Alonso-Sáez, Michael Zeder, Tommy Harding, Jakob Pernthaler, Connie Lovejoy, Stefan Bertilsson, Carlos Pedrós-Alió

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

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  18. Molecular Keys to theFrontiers in microbiology · 2016
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Laura Alonso-SáezLimnology and Science for Life Laboratory, Department of Ecology and Genetics, Uppsala University Uppsala, Sweden.
Michael ZederLimnological Station, Institute of Plant Biology, University of Zurich Kilchberg, Switzerland.
Tommy HardingDépartement de Biologie, Université Laval Québec, QC, Canada.
Jakob PernthalerLimnological Station, Institute of Plant Biology, University of Zurich Kilchberg, Switzerland.
Connie LovejoyDépartement de Biologie, Université Laval Québec, QC, Canada.
Stefan BertilssonLimnology and Science for Life Laboratory, Department of Ecology and Genetics, Uppsala University Uppsala, Sweden.
Carlos Pedrós-AlióDepartament de Biologia Marina i Oceanografia, Institut de Ciències del Mar, CSIC Barcelona, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Extremely low abundance microorganisms (members of the "rare biosphere") are believed to include dormant taxa, which can sporadically become abundant following environmental triggers. Yet, microbial transitions from rare to abundant have seldom been captured in situ, and it is uncertain how widespread these transitions are. A bloom of a single ribotype (≥99% similarity in the 16S ribosomal RNA gene) of a widespread betaproteobacterium (Janthinobacterium sp.) occurred over 2 weeks in Arctic marine waters. The Janthinobacterium population was not detected microscopically in situ in January and early February, but suddenly appeared in the water column thereafter, eventually accounting for up to 20% of bacterial cells in mid February. During the bloom, this bacterium was detected at open water sites up to 50 km apart, being abundant down to more than 300 m. This event is one of the largest monospecific bacterial blooms reported in polar oceans. It is also remarkable because Betaproteobacteria are typically found only in low abundance in marine environments. In particular, Janthinobacterium were known from non-marine habitats and had previously been detected only in the rare biosphere of seawater samples, including the polar oceans. The Arctic Janthinobacterium formed mucilagenous monolayer aggregates after short (ca. 8 h) incubations, suggesting that biofilm formation may play a role in maintaining rare bacteria in pelagic marine environments. The spontaneous mass occurrence of this opportunistic rare taxon in polar waters during the energy-limited season extends current knowledge of how and when microbial transitions between rare and abundant occur in the ocean.

Indexed as

ArcticbetaproteobacteriabiofilmbloomJanthinobacteriumrare biosphere

Identifiers

PMID25191307
PMCPMC4138443

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.