Evidence map›Paper›PMID 25190649›Full record

ArticleInvestigative ophthalmology & visual science2014

A dominant mutation in hexokinase 1 (HK1) causes retinitis pigmentosa.

Lori S Sullivan, Daniel C Koboldt, Sara J Bowne, Steven Lang, Susan H Blanton, Elizabeth Cadena, Cheryl E Avery, Richard A Lewis, Kaylie Webb-Jones, Dianna H Wheaton and 11 more

Open access · hybridAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 71 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Autosomal dominant pigmented paravenous retinochoroidal atrophy associated with pathogenic variant in HK1 gene.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2026
    Article
  4. AnInternational journal of ophthalmology · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. The Connection Between Cellular Metabolism and Retinal Disease.Advances in experimental medicine and biology · 2025
    Review
  11. Autosomal dominantGenetics in medicine open · 2025
    Article
  12. Article
  13. Article
  14. History of Finding Genes and Mutations Causing Inherited Retinal Diseases.Cold Spring Harbor perspectives in medicine · 2024
    Review
  15. Article
  16. Pigmented paravenous chorioretinal atrophy: Updated scenario.European journal of ophthalmology · 2024
    Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

21 authors at 7 institutions in 3 countries.

Lori S SullivanHuman Genetics Center, University of Texas Health Science Center, Houston, Texas, United States.
Daniel C KoboldtThe Genome Institute at Washington University, St. Louis, Missouri, United States.
Sara J BowneHuman Genetics Center, University of Texas Health Science Center, Houston, Texas, United States.
Steven LangJohn P. Hussman Institute for Human Genomics, University of Miami, Miami, Florida, United States.
Susan H BlantonJohn P. Hussman Institute for Human Genomics, University of Miami, Miami, Florida, United States.
Elizabeth CadenaHuman Genetics Center, University of Texas Health Science Center, Houston, Texas, United States.
Cheryl E AveryHuman Genetics Center, University of Texas Health Science Center, Houston, Texas, United States.
Richard A LewisDepartments of Ophthalmology, Medicine, Pediatrics, and Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States.
Kaylie Webb-JonesThe Retina Foundation of the Southwest, Dallas, Texas, United States.
Dianna H WheatonThe Retina Foundation of the Southwest, Dallas, Texas, United States.
David G BirchThe Retina Foundation of the Southwest, Dallas, Texas, United States.
Razck CoussaMcGill Ocular Genetics Laboratory, Departments of Paediatric Surgery, Human Genetics, and Ophthalmology, McGill University Health Center, Montreal, Quebec, Canada.
Huanan RenMcGill Ocular Genetics Laboratory, Departments of Paediatric Surgery, Human Genetics, and Ophthalmology, McGill University Health Center, Montreal, Quebec, Canada.
Irma LopezMcGill Ocular Genetics Laboratory, Departments of Paediatric Surgery, Human Genetics, and Ophthalmology, McGill University Health Center, Montreal, Quebec, Canada.
Christina ChakarovaInstitute of Ophthalmology, University College London, London, United Kingdom.
Robert K KoenekoopMcGill Ocular Genetics Laboratory, Departments of Paediatric Surgery, Human Genetics, and Ophthalmology, McGill University Health Center, Montreal, Quebec, Canada.
Charles A GarciaDepartment of Ophthalmology and Visual Sciences, University of Texas Health Science Center, Houston, Texas, United States.
Robert S FultonThe Genome Institute at Washington University, St. Louis, Missouri, United States.
Richard K WilsonThe Genome Institute at Washington University, St. Louis, Missouri, United States.
George M WeinstockThe Genome Institute at Washington University, St. Louis, Missouri, United States.
Stephen P DaigerHuman Genetics Center, University of Texas Health Science Center, Houston, Texas, United States Department of Ophthalmology and Visual Sciences, University of Texas Health Science Center, Houston, Texas, United States.
The University of Texas Health Science Center at Houston · USMcGill University Health Centre · CAWashington University in St. Louis · USRetina Foundation of the Southwest · USUniversity of Miami · USBaylor College of Medicine · USUniversity College London · GB

Funding

Large Scale Genome SequencingU54HG003079 · NHGRI · WASHINGTON UNIVERSITY · PI DUTCHER, SUSAN K · 2004 to 2016
$445.7M
DNA LINKAGE STUDIES OF DEGENERATIVE RETINAL DISEASESR01EY007142 · NEI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI DAIGER, STEPHEN P · 1989 to 2017
$4.1M
CIHRNEI NIH HHS EY007142NEI NIH HHS R01 EY007142NHGRI NIH HHS HG003079NHGRI NIH HHS U54 HG003079
6 · The paper itself

Abstract

purposeTo identify the cause of retinitis pigmentosa (RP) in UTAD003, a large, six-generation Louisiana family with autosomal dominant retinitis pigmentosa (adRP).

methodsA series of strategies, including candidate gene screening, linkage exclusion, genome-wide linkage mapping, and whole-exome next-generation sequencing, was used to identify a mutation in a novel disease gene on chromosome 10q22.1. Probands from an additional 404 retinal degeneration families were subsequently screened for mutations in this gene.

resultsExome sequencing in UTAD003 led to identification of a single, novel coding variant (c.2539G>A, p.Glu847Lys) in hexokinase 1 (HK1) present in all affected individuals and absent from normal controls. One affected family member carries two copies of the mutation and has an unusually severe form of disease, consistent with homozygosity for this mutation. Screening of additional adRP probands identified four other families (American, Canadian, and Sicilian) with the same mutation and a similar range of phenotypes. The families share a rare 450-kilobase haplotype containing the mutation, suggesting a founder mutation among otherwise unrelated families.

conclusionsWe identified an HK1 mutation in five adRP families. Hexokinase 1 catalyzes phosphorylation of glucose to glucose-6-phosphate. HK1 is expressed in retina, with two abundant isoforms expressed at similar levels. The Glu847Lys mutation is located at a highly conserved position in the protein, outside the catalytic domains. We hypothesize that the effect of this mutation is limited to the retina, as no systemic abnormalities in glycolysis were detected. Prevalence of the HK1 mutation in our cohort of RP families is 1%.

Indexed as

MutationAdolescentAdultChildChild, PreschoolDNADNA Mutational AnalysisFemaleFollow-Up StudiesGenes, DominantGenetic LinkageHaplotypesHexokinaseHumansMaleMiddle AgedDNAHexokinaseHK1 protein, humanhexokinaseinherited retinal dystrophyretinitis pigmentosa

Identifiers

PMID25190649
PMCPMC4224580
OpenAlexW1990801986

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.