Evidence map›Paper›PMID 25188731›Full record

ArticleACS chemical biology2014

Genome editing-enabled HTS assays expand drug target pathways for Charcot-Marie-tooth disease.

James Inglese, Patricia Dranchak, John J Moran, Sung-Wook Jang, Rajini Srinivasan, Yolanda Santiago, Lei Zhang, Rajarshi Guha, Natalia Martinez, Ryan MacArthur and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in ACS chemical biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Emerging Therapies for Charcot-Marie-Tooth Inherited Neuropathies.International journal of molecular sciences · 2021
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Genome-Edited Cell Lines for High-Throughput Screening.Methods in molecular biology (Clifton, N.J.) · 2018
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

James IngleseNational Center for Advancing Translational Sciences, National Institutes of Health , Rockville, Maryland 20850, United States.
Patricia Dranchak
John J Moran
Sung-Wook Jang
Rajini Srinivasan
Yolanda Santiago
Lei Zhang
Rajarshi Guha
Natalia Martinez
Ryan MacArthur
Gregory J Cost
John Svaren
National Center for Advancing Translational Sciences · USNational Institutes of Health · USSangamo BioSciences (United States) · USUniversity of Wisconsin–Madison · US

Funding

WISCONSIN CENTER ON MENTAL RETARDATION: CORE SUPPORTP30HD003352 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI MESSING, ALBEE · 1985 to 2015
$25.2M
Regulation of PMP22 Expression in Peripheral NerveR01NS083841 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI SVAREN, JOHN P · 2014 to 2018
$1.6M
Charcot-Marie-Tooth (CMT) DiseaseZIATR000049 · NCATS · NATIONAL CENTER FOR ADVANCING TRANSLATIONAL SCIENCES · PI INGLESE, JAMES · 2015 to 2023
$670k
Drug Screening Assays for Charcot-Marie-Tooth DiseaseR21NS073726 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI SVAREN, JOHN P · 2011 to 2012
$414k
Intramural NIH HHSNICHD NIH HHS P30 HD003352NICHD NIH HHS P30HD03352NINDS NIH HHS R01 NS083841NINDS NIH HHS R21 NS073726NINDS NIH HHS R21 NS73726
6 · The paper itself

Abstract

Copy number variation resulting in excess PMP22 protein causes the peripheral neuropathy Charcot-Marie-Tooth disease, type 1A. To broadly interrogate chemically sensitive transcriptional pathways controlling PMP22 protein levels, we used the targeting precision of TALEN-mediated genome editing to embed reporters within the genetic locus harboring the Peripheral Myelin Protein 22 (Pmp22) gene. Using a Schwann cell line with constitutively high endogenous levels of Pmp22, we obtained allelic insertion of secreted bioluminescent reporters with sufficient signal to enable a 1536-well assay. Our findings from the quantitative high-throughput screening (qHTS) of several thousand drugs and clinically investigated compounds using this assay design both overlapped and expanded results from a previous assay using a randomly inserted reporter gene controlled by a single regulatory element of the Pmp22 gene. A key difference was the identification of a kinase-controlled inhibitory pathway of Pmp22 transcription revealed by the activity of the Protein kinase C (PKC)-modulator bryostatin.

Indexed as

Genome, HumanCharcot-Marie-Tooth DiseaseHigh-Throughput Nucleotide SequencingHumans

Identifiers

PMID25188731
PMCPMC4245164
OpenAlexW2316947309

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.