Evidence map›Paper›PMID 25188400›Full record

ArticlePloS one2014

Docking studies of Pakistani HCV NS3 helicase: a possible antiviral drug target.

Kaneez Fatima, Shilu Mathew, Mohd Suhail, Ashraf Ali, Ghazi Damanhouri, Esam Azhar, Ishtiaq Qadri

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Mechanism and regulation of mitophagy in liver diseases: a review.Frontiers in cell and developmental biology · 2025
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  5. Review
  6. Review
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  8. Tale of Viruses in Male Infertility.Advances in experimental medicine and biology · 2022
    Article
  9. Review
  10. Docking andJournal of applied phycology · 2021
    Article
  11. Review
  12. Review
  13. Article
  14. Review
  15. Hepatitis C virus and neurological damage.World journal of hepatology · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Kaneez FatimaIQ Institute of Infection and Immunity, Lahore, Punjab, Pakistan.
Shilu MathewCenter of Excellence in Genomic Medicine Research, King Abdul Aziz University, Jeddah, Saudi Arabia.
Mohd SuhailKing Fahd Medical Research Center, King Abdul Aziz University, Jeddah, Saudi Arabia.
Ashraf AliKing Fahd Medical Research Center, King Abdul Aziz University, Jeddah, Saudi Arabia.
Ghazi DamanhouriKing Fahd Medical Research Center, King Abdul Aziz University, Jeddah, Saudi Arabia.
Esam AzharKing Fahd Medical Research Center, King Abdul Aziz University, Jeddah, Saudi Arabia.
Ishtiaq QadriKing Fahd Medical Research Center, King Abdul Aziz University, Jeddah, Saudi Arabia.
King Abdul Aziz University Hospital · SAPunjab Institute of Cardiology · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The nonstructural protein 3 (NS3) of hepatitis C virus (HCV) helicase is believed to be essential for viral replication and has become an attractive target for the development of antiviral drugs. The study of helicase is useful for elucidating its involvement in positive sense single-stranded RNA virus replication and to serve as templates for the design of novel antiviral drugs. In recent years, several models have been proposed on the conformational change leading to protein movement and RNA unwinding. Some compounds have been recently reported to inhibit the helicase and these include small molecules, RNA aptamers and antibodies. The current study is designed to help gain insights for the consideration of potential inhibitors for Pakistani HCV NS3 helicase protein. We have cloned, expressed and purified HCV NS3 helicase from Pakistani HCV serum samples and determined its 3D structure and employed it further in computational docking analysis to identify inhibitors against HCV genotype 3a (GT3a),including six antiviral key molecules such as quercetin, beta-carotene, resveratrol, catechins, lycopene and lutein. The conformation obtained after docking showed good hydrogen bond (HBond) interactions with best docking energy for quercetin and catechins followed by resveratrol and lutein. These anti-helicase key molecules will offer an alternative attraction to target the viral helicase, due to the current limitation with the interferon resistance treatment and presences of high rate of resistance in anti-protease inhibitor classes.

Indexed as

Antiviral AgentsAptamers, NucleotideDEAD-box RNA HelicasesGenotypeHepacivirusNucleoside-TriphosphataseProtein Structure, TertiaryRNA, ViralSerine EndopeptidasesViral Nonstructural ProteinsViral ProteasesAntiviral AgentsAptamers, NucleotideDEAD-box RNA HelicasesNS3 protein, hepatitis C virusNucleoside-TriphosphataseRNA, ViralSerine EndopeptidasesViral Nonstructural ProteinsViral Proteases

Identifiers

PMID25188400
PMCPMC4154687
OpenAlexW1972333393

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.