Evidence map›Paper›PMID 25187573›Full record

ArticleMolecular & cellular proteomics : MCP2014

The O-glycomap of lubricin, a novel mucin responsible for joint lubrication, identified by site-specific glycopeptide analysis.

Liaqat Ali, Sarah A Flowers, Chunsheng Jin, Eric Paul Bennet, Anna-Karin H Ekwall, Niclas G Karlsson

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 66 citations in OpenAlex.

  1. Article
  2. Lubricin's Mucin Domain Has Strong Polyproline Type II Helical Character.Computational and structural biotechnology journal · 2026
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  7. Recombinant manufacturing of multispecies biolubricants.bioRxiv : the preprint server for biology · 2024
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  16. Decrease of core 2The Journal of biological chemistry · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Liaqat AliFrom the ‡Department of Medical Biochemistry, Institute of Biomedicine, University of Gothenburg, Box 440, Medicinaregatan 9A, 405 30, Gothenburg, Sweden;
Sarah A FlowersFrom the ‡Department of Medical Biochemistry, Institute of Biomedicine, University of Gothenburg, Box 440, Medicinaregatan 9A, 405 30, Gothenburg, Sweden;
Chunsheng JinFrom the ‡Department of Medical Biochemistry, Institute of Biomedicine, University of Gothenburg, Box 440, Medicinaregatan 9A, 405 30, Gothenburg, Sweden;
Eric Paul Bennet§Department of Odontology, Copenhagen Center for Glycomics, University of Copenhagen, Norre Alle 20, DK-2200 Copenhagen N, Denmark;
Anna-Karin H Ekwall¶Department of Rheumatology and Inflammation Research, Institute of Medicine, University of Gothenburg, Guldhedsgatan 10A, SE-41346, Gothenburg, Sweden.
Niclas G KarlssonFrom the ‡Department of Medical Biochemistry, Institute of Biomedicine, University of Gothenburg, Box 440, Medicinaregatan 9A, 405 30, Gothenburg, Sweden; niclas.karlsson@medkem.gu.se.
University of Gothenburg · SEUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The lubricative, heavily glycosylated mucin-like synovial glycoprotein lubricin has previously been observed to contain glycosylation changes related to rheumatoid and osteoarthritis. Thus, a site-specific investigation of the glycosylation of lubricin was undertaken, in order to further understand the pathological mechanisms involved in these diseases. Lubricin contains an serine/threonine/proline (STP)-rich domain composed of imperfect tandem repeats (EPAPTTPK), the target for O-glycosylation. In this study, using a liquid chromatography-tandem mass spectrometry approach, employing both collision-induced and electron-transfer dissociation fragmentation methods, we identified 185 O-glycopeptides within the STP-rich domain of human synovial lubricin. This showed that adjacent threonine residues within the central STP-rich region could be simultaneously and/or individually glycosylated. In addition to core 1 structures responsible for biolubrication, core 2 O-glycopeptides were also identified, indicating that lubricin glycosylation may have other roles. Investigation of the expression of polypeptide N-acetylgalactosaminyltransferase genes was carried out using cultured primary fibroblast-like synoviocytes, a cell type that expresses lubricin in vivo. This analysis showed high mRNA expression levels of the less understood polypeptide N-acetylgalactosaminyltransferase 15 and 5 in addition to the ubiquitously expressed polypeptide N-acetylgalactosaminyltransferase 1 and 2 genes. This suggests that there is a unique combination of transferase genes important for the O-glycosylation of lubricin. The site-specific glycopeptide analysis covered 82% of the protein sequence and showed that lubricin glycosylation displays both micro- and macroheterogeneity. The density of glycosylation was shown to be high: 168 sites of O-glycosylation, predominately sialylated, were identified. These glycosylation sites were focused in the central STP-rich region, giving the domain a negative charge. The more positively charged lysine and arginine residues in the N and C termini suggest that synovial lubricin exists as an amphoteric molecule. The identification of these unique properties of lubricin may provide insight into the important low-friction lubricating functions of lubricin during natural joint movement.

Indexed as

Amino Acid SequenceArginineCarbohydrate SequenceFibroblastsGene ExpressionGlycopeptidesGlycoproteinsGlycosylationHumansIsoenzymesLubricationLysineMolecular Sequence DataN-AcetylgalactosaminyltransferasesPeptide MappingPolypeptide N-acetylgalactosaminyltransferaseArginineGlycopeptidesGlycoproteinsIsoenzymesLysineN-AcetylgalactosaminyltransferasesPolypeptide N-acetylgalactosaminyltransferaseProteoglycan 4Threonine

Identifiers

PMID25187573
PMCPMC4256492
OpenAlexW2152827658

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.