Evidence map›Paper›PMID 25185119›Full record

ArticleChemical research in toxicology2014

Assay of protein and peptide adducts of cholesterol ozonolysis products by hydrophobic and click enrichment methods.

Katherine Windsor, Thiago C Genaro-Mattos, Sayuri Miyamoto, Donald F Stec, Hye-Young H Kim, Keri A Tallman, Ned A Porter

Open access · greenAbstract read
In one paragraph

Article in Chemical research in toxicology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.4field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Oxysterols Modify NLRP2 in Epithelial Cells, Identifying a Mediator of Ozone-induced Inflammation.American journal of respiratory cell and molecular biology · 2021
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Biochemical properties of cholesterol aldehyde secosterol and its derivatives.Journal of clinical biochemistry and nutrition · 2018
    Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Katherine WindsorDepartment of Chemistry, ‡Vanderbilt Institute of Chemical Biology, and ∥Vanderbilt Kennedy Center for Research on Human Development, Vanderbilt University , Nashville, Tennessee 37235, United States.
Thiago C Genaro-Mattos
Sayuri Miyamoto
Donald F Stec
Hye-Young H Kim
Keri A Tallman
Ned A Porter
Universidade de São Paulo · BRVanderbilt University · US

Funding

Protein Adducts and Proteome Profiles in Oxidative StressP01ES013125 · NIEHS · VANDERBILT UNIVERSITY · PI PORTER, NED ALLEN · 2005 to 2012
$12.6M
SLOS and Neuronal Oxidative StressR01HD064727 · NICHD · VANDERBILT UNIVERSITY · PI PORTER, NED ALLEN · 2010 to 2020
$3.7M
NICHD NIH HHS R01 HD064727NIEHS NIH HHS ES013125
6 · The paper itself

Abstract

Cholesterol undergoes ozonolysis to afford a variety of oxysterol products, including cholesterol-5,6-epoxide (CholEp) and the isomeric aldehydes secosterol A (seco A) and secosterol B (seco B). These oxysterols display numerous important biological activities, including protein adduction; however, much remains to be learned about the identity of the reactive species and the range of proteins modified by these oxysterols. Here, we synthesized alkynyl derivatives of cholesterol-derived oxysterols and employed a straightforward detection method to establish secosterols A and B as the most protein-reactive of the oxysterols tested. Model adduction studies with an amino acid, peptides, and proteins provide evidence for the potential role of secosterol dehydration products in protein adduction. Hydrophobic separation methods-Folch extraction and solid phase extraction (SPE)-were successfully applied to enrich oxysterol-adducted peptide species, and LC-MS/MS analysis of a model peptide-seco adduct revealed a unique fragmentation pattern (neutral loss of 390 Da) for that species. Coupling a hydrophobic enrichment method with proteomic analysis utilizing characteristic fragmentation patterns facilitates the identification of secosterol-modified peptides and proteins in an adducted protein. More broadly, these improved enrichment methods may give insight into the role of oxysterols and ozone exposure in the pathogenesis of a variety of diseases, including atherosclerosis, Alzheimer's disease, Parkinson's disease, and asthma.

Indexed as

AldehydesAmino Acid SequenceBiotinCholesterolChromatography, High Pressure LiquidClick ChemistryCytochromes cHumansHydrophobic and Hydrophilic InteractionsIsomerismMolecular Sequence DataOzonePeptidesProteinsSerum AlbuminSolid Phase ExtractionAldehydesBiotinCholesterolcholesterol alpha-oxideCytochromes cOzonePeptidesProteinsSerum AlbuminStreptavidin

Identifiers

PMID25185119
PMCPMC4203397
OpenAlexW2159441826

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.