Evidence map›Paper›PMID 25184538›Full record

ArticleThe Biochemical journal2014

Nucleotide binding triggers a conformational change of the CBS module of the magnesium transporter CNNM2 from a twisted towards a flat structure.

María Ángeles Corral-Rodríguez, Marchel Stuiver, Guillermo Abascal-Palacios, Tammo Diercks, Iker Oyenarte, June Ereño-Orbea, Alain Ibáñez de Opakua, Francisco J Blanco, José Antonio Encinar, Vojtêch Spiwok and 4 more

Open access · greenAbstract read
In one paragraph

Article in The Biochemical journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Review
  3. Two novel variants inFrontiers in genetics · 2025
    Article
  4. Dimerization of the CNNM extracellular domain.Protein science : a publication of the Protein Society · 2024
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. NovelFrontiers in genetics · 2022
    Article
  11. Article
  12. Article
  13. Diseases caused by mutations in the NaAmerican journal of physiology. Cell physiology · 2021
    Review
  14. Article
  15. Article
  16. Structural basis for the MgScience advances · 2021
    Article
  17. Frontiers in pediatrics · 2021
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 3 countries.

María Ángeles Corral-Rodríguez*Structural Biology Unit, Center for Cooperative Research in Bioscience (CIC bioGUNE), Technology Park of Bizkaia, 48160 Bizkaia, Spain.
Marchel Stuiver†Department of Pediatric Nephrology, Charité Universitäts Medizin, Berlin, 13353 Berlin, Germany.
Guillermo Abascal-Palacios*Structural Biology Unit, Center for Cooperative Research in Bioscience (CIC bioGUNE), Technology Park of Bizkaia, 48160 Bizkaia, Spain.
Tammo Diercks*Structural Biology Unit, Center for Cooperative Research in Bioscience (CIC bioGUNE), Technology Park of Bizkaia, 48160 Bizkaia, Spain.
Iker Oyenarte*Structural Biology Unit, Center for Cooperative Research in Bioscience (CIC bioGUNE), Technology Park of Bizkaia, 48160 Bizkaia, Spain.
June Ereño-Orbea*Structural Biology Unit, Center for Cooperative Research in Bioscience (CIC bioGUNE), Technology Park of Bizkaia, 48160 Bizkaia, Spain.
Alain Ibáñez de Opakua*Structural Biology Unit, Center for Cooperative Research in Bioscience (CIC bioGUNE), Technology Park of Bizkaia, 48160 Bizkaia, Spain.
Francisco J Blanco
José Antonio Encinar§Instituto de Biología Molecular y Celular, Universidad Miguel Hernández, Avda. del Ferrocarril s/n, 03202 Elche (Alicante), Spain.
Vojtêch Spiwok∥Department of Biochemistry and Microbiology, Institute of Chemical Technology, Prague, Technicka 3, Prague 6, 16628, Czech Republic.
Hiroyuki Terashima¶Department of Anesthesiology, Weill Cornell Medical College, Weill Cornell Medical College, 1300 York Avenue, NY, NY 10065, U.S.A.
Alessio Accardi¶Department of Anesthesiology, Weill Cornell Medical College, Weill Cornell Medical College, 1300 York Avenue, NY, NY 10065, U.S.A.
Dominik Müller†Department of Pediatric Nephrology, Charité Universitäts Medizin, Berlin, 13353 Berlin, Germany.
Luis Alfonso Martínez-Cruz*Structural Biology Unit, Center for Cooperative Research in Bioscience (CIC bioGUNE), Technology Park of Bizkaia, 48160 Bizkaia, Spain.
CIC bioGUNE · ESCharité - Universitätsmedizin Berlin · DEUniversitat de Miguel Hernández d'Elx · ESUniversity of Chemistry and Technology, Prague · CZ

Funding

Structure and function of chloride channels and transportersR01GM085232 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI ACCARDI, ALESSIO · 2009 to 2013
$1.7M
NIGMS NIH HHS R01 GM085232
6 · The paper itself

Abstract

Recent studies suggest CNNM2 (cyclin M2) to be part of the long-sought basolateral Mg2+ extruder at the renal distal convoluted tubule, or its regulator. In the present study, we explore structural features and ligand-binding capacities of the Bateman module of CNNM2 (residues 429-584), an intracellular domain structurally equivalent to the region involved in Mg2+ handling by the bacterial Mg2+ transporter MgtE, and AMP binding by the Mg2+ efflux protein CorC. Additionally, we studied the structural impact of the pathogenic mutation T568I located in this region. Our crystal structures reveal that nucleotides such as AMP, ADP or ATP bind at only one of the two cavities present in CNNM2429-584. Mg2+ favours ATP binding by alleviating the otherwise negative charge repulsion existing between acidic residues and the polyphosphate group of ATP. In crystals CNNM2429-584 forms parallel dimers, commonly referred to as CBS (cystathionine β-synthase) modules. Interestingly, nucleotide binding triggers a conformational change in the CBS module from a twisted towards a flat disc-like structure that mostly affects the structural elements connecting the Bateman module with the transmembrane region. We furthermore show that the T568I mutation, which causes dominant hypomagnesaemia, mimics the structural effect induced by nucleotide binding. The results of the present study suggest that the T568I mutation exerts its pathogenic effect in humans by constraining the conformational equilibrium of the CBS module of CNNM2, which becomes 'locked' in its flat form.

Indexed as

Amino Acid SequenceBinding SitesCation Transport ProteinsCrystallizationCyclinsCystathionine beta-SynthaseHumansMolecular Sequence DataMutationNucleotidesProtein ConformationProtein Structure, SecondaryCation Transport ProteinsCNNM2 protein, humanCyclinsCystathionine beta-SynthaseNucleotides

Identifiers

PMID25184538
PMCPMC7318797
OpenAlexW2312641979

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.