Evidence map›Paper›PMID 25184340›Full record

ArticlePloS one2014

Grsf1-induced translation of the SNARE protein Use1 is required for expansion of the erythroid compartment.

Andrzej Nieradka, Christoph Ufer, Klaske Thiadens, Godfrey Grech, Rastislav Horos, Marleen van Coevorden-Hameete, Emile van den Akker, Sajad Sofi, Hartmut Kuhn, Marieke von Lindern

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Andrzej NieradkaDept. Hematology, Erasmus MC, Rotterdam, The Netherlands.
Christoph UferInst. Biochemistry, University Medicine Berlin-Charité, Berlin, Germany.
Klaske ThiadensDept. Hematopoiesis at Sanquin Research, and Landsteiner Laboratory AMC/UvA, Amsterdam, The Netherlands.
Godfrey GrechDept. Pathology, University of Malta Medical School, Msida, Malta.
Rastislav HorosDept. Hematology, Erasmus MC, Rotterdam, The Netherlands.
Marleen van Coevorden-HameeteDept. Hematology, Erasmus MC, Rotterdam, The Netherlands.
Emile van den AkkerDept. Hematopoiesis at Sanquin Research, and Landsteiner Laboratory AMC/UvA, Amsterdam, The Netherlands.
Sajad SofiInst. Biochemistry, University Medicine Berlin-Charité, Berlin, Germany.
Hartmut KuhnInst. Biochemistry, University Medicine Berlin-Charité, Berlin, Germany.
Marieke von LindernDept. Hematology, Erasmus MC, Rotterdam, The Netherlands; Dept. Hematopoiesis at Sanquin Research, and Landsteiner Laboratory AMC/UvA, Amsterdam, The Netherlands.
Charité - Universitätsmedizin Berlin · DESanquin · NLErasmus University Rotterdam · NLErasmus MC · NLUniversity of Malta · MT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Induction of cell proliferation requires a concomitant increase in the synthesis of glycosylated lipids and membrane proteins, which is dependent on ER-Golgi protein transport by CopII-coated vesicles. In this process, retrograde transport of ER resident proteins from the Golgi is crucial to maintain ER integrity, and allows for anterograde transport to continue. We previously showed that expression of the CopI specific SNARE protein Use1 (Unusual SNARE in the ER 1) is tightly regulated by eIF4E-dependent translation initiation of Use1 mRNA. Here we investigate the mechanism that controls Use1 mRNA translation. The 5'UTR of mouse Use1 contains a 156 nt alternatively spliced intron. The non-spliced form is the predominantly translated mRNA. The alternatively spliced sequence contains G-repeats that bind the RNA-binding protein G-rich sequence binding factor 1 (Grsf1) in RNA band shift assays. The presence of these G-repeats rendered translation of reporter constructs dependent on the Grsf1 concentration. Down regulation of either Grsf1 or Use1 abrogated expansion of erythroblasts. The 5'UTR of human Use1 lacks the splice donor site, but contains an additional upstream open reading frame in close proximity of the translation start site. Similar to mouse Use1, also the human 5'UTR contains G-repeats in front of the start codon. In conclusion, Grsf1 controls translation of the SNARE protein Use1, possibly by positioning the 40S ribosomal subunit and associated translation factors in front of the translation start site.

Indexed as

Alternative SplicingPeptide Chain Initiation, Translational3' Untranslated RegionsAnimalsBase SequenceCell ProliferationCOP-Coated VesiclesEndoplasmic ReticulumErythroblastsEukaryotic Initiation Factor-4EGene Expression RegulationGolgi ApparatusHEK293 CellsHumansMiceMice, Inbred C57BL3' Untranslated RegionsEukaryotic Initiation Factor-4EGRSF1 protein, humanPoly(A)-Binding ProteinsQc-SNARE ProteinsSNARE ProteinsUbiquitinsUse1 protein, humanUse1 protein, mouseVesicular Transport Proteins

Identifiers

PMID25184340
PMCPMC4153549
OpenAlexW1994317594

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.