Evidence map›Paper›PMID 25183745›Full record

ArticleJournal of experimental botany2015

Chloroplast-encoded serotonin N-acetyltransferase in the red alga Pyropia yezoensis: gene transition to the nucleus from chloroplasts.

Yeong Byeon, Hyoung Yool Lee, Dong-Woog Choi, Kyoungwhan Back

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
8.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 57 citations in OpenAlex.

  1. Review
  2. Review
  3. Biomolecules · 2023
    Article
  4. Melatonin Involved in Protective Effects against Cadmium Stress inInternational journal of molecular sciences · 2023
    Article
  5. Functional Characterization of ArylalkylamineAntioxidants (Basel, Switzerland) · 2022
    Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Melatonin transport into mitochondria.Cellular and molecular life sciences : CMLS · 2017
    Review
  15. Article
  16. Review
  17. Article
  18. Endophytic BacteriumFrontiers in plant science · 2016
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Yeong ByeonDepartment of Biotechnology, Interdisciplinary Program of Bioenergy and Biomaterials, Bioenergy Research Center, College of Agriculture and Life Sciences, Chonnam National University, Gwangju, Republic of Korea.
Hyoung Yool LeeDepartment of Biotechnology, Interdisciplinary Program of Bioenergy and Biomaterials, Bioenergy Research Center, College of Agriculture and Life Sciences, Chonnam National University, Gwangju, Republic of Korea.
Dong-Woog ChoiDepartment of Biology Education, Chonnam National University, Gwangju 500-757, Republic of Korea.
Kyoungwhan BackDepartment of Biotechnology, Interdisciplinary Program of Bioenergy and Biomaterials, Bioenergy Research Center, College of Agriculture and Life Sciences, Chonnam National University, Gwangju, Republic of Korea kback@chonnam.ac.kr.
Chonnam National University · KRGwangju National University of Education · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Melatonin biosynthesis involves the N-acetylation of arylalkylamines such as serotonin, which is catalysed by serotonin N-acetyltransferase (SNAT), the penultimate enzyme of melatonin biosynthesis in both animals and plants. Here, we report the functional characterization of a putative N-acetyltransferase gene in the chloroplast genome of the alga laver (Pyropia yezoensis, formerly known as Porphyra yezoensis) with homology to the rice SNAT gene. To confirm that the putative Pyropia yezoensis SNAT (PySNAT) gene encodes an SNAT, we cloned the full-length chloroplastidic PySNAT gene by PCR and purified the recombinant PySNAT protein from Escherichia coli. PySNAT was 174 aa and had 50% amino acid identity with cyanobacteria SNAT. Purified recombinant PySNAT showed a peak activity at 55 °C with a K m of 467 µM and V max of 28 nmol min-1 mg(-1) of protein. Unlike other plant SNATs, PySNAT localized to the cytoplasm due to a lack of N-terminal chloroplast transit peptides. Melatonin was present at 0.16ng g(-1) of fresh mass but increased during heat stress. Phylogenetic analysis of the sequence suggested that PySNAT has evolved from the cyanobacteria SNAT gene via endosymbiotic gene transfer. Additionally, the chloroplast transit peptides of plant SNATs were acquired 1500 million years ago, concurrent with the appearance of green algae.

Indexed as

Algal ProteinsAmino Acid SequenceArylalkylamine N-AcetyltransferaseCell NucleusChloroplastsMelatoninPhylogenyPlant Growth RegulatorsPlant ProteinsRhodophytaSequence Analysis, DNAAlgal ProteinsArylalkylamine N-AcetyltransferaseMelatoninPlant Growth RegulatorsPlant ProteinsEndosymbiosislavermelatoninPyropiared algaeserotonin N-acetyltransferase

Identifiers

PMID25183745
PMCPMC4321536
OpenAlexW2129097863

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.