Evidence map›Paper›PMID 25183427›Full record

ArticleBMC microbiology2014

Clostridium difficile has a single sortase, SrtB, that can be inhibited by small-molecule inhibitors.

Elizabeth H Donahue, Lisa F Dawson, Esmeralda Valiente, Stuart Firth-Clark, Meriel R Major, Eddy Littler, Trevor R Perrior, Brendan W Wren

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Rising prevalence and drug resistance ofFrontiers in cellular and infection microbiology · 2024
    Review
  3. Sortase-encoding genes,Frontiers in microbiology · 2024
    Article
  4. Article
  5. Review
  6. Article
  7. Functional analysis ofThe Journal of biological chemistry · 2020
    Article
  8. Article
  9. Article
  10. Review
  11. Structural Insights into Substrate Recognition byFrontiers in cellular and infection microbiology · 2016
    Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Elizabeth H Donahue
Lisa F Dawson
Esmeralda Valiente
Stuart Firth-Clark
Meriel R Major
Eddy Littler
Trevor R Perrior
Brendan W WrenPathogen Molecular Biology Department, London School of Hygiene and Tropical Medicine, Keppel Street, London WC1E 7HT, UK. brendan.wren@lshtm.ac.uk.
Domainex (United Kingdom) · GBLondon School of Hygiene & Tropical Medicine · GBUniversity of London · GB

Funding

Medical Research Council 499 94717Medical Research Council MR/K000551/1Wellcome TrustWellcome Trust 086418/Z/
6 · The paper itself

Abstract

backgroundBacterial sortases are transpeptidases that covalently anchor surface proteins to the peptidoglycan of the Gram-positive cell wall. Sortase protein anchoring is mediated by a conserved cell wall sorting signal on the anchored protein, comprising of a C-terminal recognition sequence containing an "LPXTG-like" motif, followed by a hydrophobic domain and a positively charged tail.

resultsWe report that Clostridium difficile strain 630 encodes a single sortase (SrtB). A FRET-based assay was used to confirm that recombinant SrtB catalyzes the cleavage of fluorescently labelled peptides containing (S/P)PXTG motifs. Strain 630 encodes seven predicted cell wall proteins with the (S/P)PXTG sorting motif, four of which are conserved across all five C. difficile lineages and include potential adhesins and cell wall hydrolases. Replacement of the predicted catalytic cysteine residue at position 209 with alanine abolishes SrtB activity, as does addition of the cysteine protease inhibitor MTSET to the reaction. Mass spectrometry reveals the cleavage site to be between the threonine and glycine residues of the (S/P)PXTG peptide. Small-molecule inhibitors identified through an in silico screen inhibit SrtB enzymatic activity to a greater degree than MTSET.

conclusionsThese results demonstrate for the first time that C. difficile encodes a single sortase enzyme, which cleaves motifs containing (S/P)PXTG in-vitro. The activity of the sortase can be inhibited by mutation of a cysteine residue in the predicted active site and by small-molecule inhibitors.

Indexed as

Catalytic DomainCell WallClostridioides difficileCysteineEnzyme InhibitorsHydrolysisMembrane ProteinsMutant ProteinsMutation, MissensePeptidoglycanPeptidyl TransferasesCysteineEnzyme InhibitorsMembrane ProteinsMutant ProteinsPeptidoglycanPeptidyl Transferases

Identifiers

PMID25183427
PMCPMC4155245
OpenAlexW2153807320

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.