Evidence map›Paper›PMID 25182511›Full record

ArticleBone2014

p107-Dependent recruitment of SWI/SNF to the alkaline phosphatase promoter during osteoblast differentiation.

Stephen Flowers, Parth J Patel, Stephanie Gleicher, Kamal Amer, Eric Himelman, Shruti Goel, Elizabeth Moran

Open access · greenAbstract read
In one paragraph

Article in Bone, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.1field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Stephen FlowersDepartment of Orthopaedics, New Jersey Medical School, Rutgers, the State University of New Jersey, Newark, NJ 07103, USA.
Parth J PatelDepartment of Orthopaedics, New Jersey Medical School, Rutgers, the State University of New Jersey, Newark, NJ 07103, USA.
Stephanie GleicherDepartment of Orthopaedics, New Jersey Medical School, Rutgers, the State University of New Jersey, Newark, NJ 07103, USA.
Kamal AmerDepartment of Orthopaedics, New Jersey Medical School, Rutgers, the State University of New Jersey, Newark, NJ 07103, USA.
Eric HimelmanDepartment of Orthopaedics, New Jersey Medical School, Rutgers, the State University of New Jersey, Newark, NJ 07103, USA.
Shruti GoelDepartment of Orthopaedics, New Jersey Medical School, Rutgers, the State University of New Jersey, Newark, NJ 07103, USA.
Elizabeth MoranDepartment of Orthopaedics, New Jersey Medical School, Rutgers, the State University of New Jersey, Newark, NJ 07103, USA. Electronic address: moranel@njms.rutgers.edu.
Rutgers, The State University of New Jersey · US

Funding

PROFESSIONAL ONCOLOGY EDUCATION PROGRAMR25CA019536 · NCI · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI MAHON, GWENDOLYN MARIA, WHITEHEAD, IAN P · 1985 to 2014
$2.8M
SWI/SNF-related complex in osteoblast differentiationR01GM073257 · NIGMS · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI MORAN, ELIZABETH · 2006 to 2009
$1.1M
Interdisciplinary Training Program in Cancer ResearchT32CA134268 · NCI · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI WHITEHEAD, IAN P · 2010 to 2014
$790k
NCI NIH HHS R25 CA019536NCI NIH HHS R25-CA-019536NCI NIH HHS T32 CA134268NCI NIH HHS T32-CA134268NIGMS NIH HHS R01 GM073257NIGMS NIH HHS R01GM073257
6 · The paper itself

Abstract

The retinoblastoma protein family is intimately involved in the regulation of tissue specific gene expression during mesenchymal stem cell differentiation. The role of the following proteins, pRB, p107 and p130, is particularly significant in differentiation to the osteoblast lineage, as human germ-line mutations of RB1 greatly increase susceptibility to osteosarcoma. During differentiation, pRB directly targets certain osteogenic genes for activation, including the alkaline phosphatase-encoding gene Alpl. Chromatin immunoprecipitation (ChIP) assays indicate that Alpl is targeted by p107 in differentiating osteoblasts selectively during activation with the same dynamics as pRB, which suggests that p107 helps promote Alpl activation. Mouse models indicate overlapping roles for pRB and p107 in bone and cartilage formation, but very little is known about direct tissue-specific gene targets of p107, or the consequences of targeting by p107. Here, the roles of p107 and pRB were compared using shRNA-mediated knockdown genetics in an osteoblast progenitor model, MC3T3-E1 cells. The results show that p107 has a distinct role along with pRB in induction of Alpl. Deficiency of p107 does not impede recruitment of transcription factors recognized as pRB co-activation partners at the promoter; however, p107 is required for the efficient recruitment of an activating SWI/SNF chromatin-remodeling complex, an essential event in Alpl induction.

Indexed as

Alkaline PhosphataseAnimalsCell DifferentiationChromatin ImmunoprecipitationChromosomal Proteins, Non-HistoneGene Expression RegulationGene Knockdown TechniquesMiceOsteoblastsPromoter Regions, GeneticRetinoblastoma-Like Protein p107Retinoblastoma ProteinReverse Transcriptase Polymerase Chain ReactionStem CellsTranscription FactorsAlkaline PhosphataseALPL protein, mouseChromosomal Proteins, Non-HistoneRetinoblastoma-Like Protein p107Retinoblastoma ProteinSWI-SNF-B chromatin-remodeling complexTranscription FactorsAlplOsteoblastsp107pRBSWI/SNF

Identifiers

PMID25182511
PMCPMC5222550
OpenAlexW2015334628

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.