Evidence map›Paper›PMID 25182489›Full record

ArticleJournal of bacteriology2014

Bicarbonate increases binding affinity of Vibrio cholerae ToxT to virulence gene promoters.

Joshua J Thomson, Jeffrey H Withey

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 38 citations in OpenAlex.

  1. Strain-dependentFrontiers in microbiology · 2026
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  7. Siderophore piracy enhancesMicrobiology (Reading, England) · 2020
    Article
  8. Article
  9. Cholera Toxin Production inFrontiers in microbiology · 2020
    Article
  10. Virulence Regulation and Innate Host Response in the Pathogenicity ofFrontiers in cellular and infection microbiology · 2020
    Review
  11. Article
  12. Article
  13. Regulated Proteolysis inFrontiers in cellular and infection microbiology · 2019
    Review
  14. Article
  15. Article
  16. Vibrio cholerae Biofilms and Cholera Pathogenesis.PLoS neglected tropical diseases · 2016
    Review
  17. [Bio-protocol · 2015
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Joshua J ThomsonDepartment of Immunology and Microbiology, Wayne State University School of Medicine, Detroit, Michigan, USA.
Jeffrey H WitheyDepartment of Immunology and Microbiology, Wayne State University School of Medicine, Detroit, Michigan, USA jwithey@med.wayne.edu.
Wayne State University · US

Funding

Mechanisms for control of Vibrio cholerae virulenceR56AI093622 · NIAID · WAYNE STATE UNIVERSITY · PI WITHEY, JEFFREY H · 2011 to 2011
$361k
Function of Vibrio cholerae ToxTK22AI071011 · NIAID · WAYNE STATE UNIVERSITY · PI WITHEY, JEFFREY H · 2007 to 2008
$270k
NIAID NIH HHS K22 AI071011NIAID NIH HHS R56 AI093622
6 · The paper itself

Abstract

The major Vibrio cholerae virulence gene transcription activator, ToxT, is responsible for the production of the diarrhea-inducing cholera toxin (CT) and the major colonization factor, toxin coregulated pilus (TCP). In addition to the two primary virulence factors mentioned, ToxT is responsible for the activation of accessory virulence genes, such as aldA, tagA, acfA, acfD, tcpI, and tarAB. ToxT activity is negatively modulated by bile and unsaturated fatty acids found in the upper small intestine. Conversely, previous work identified another intestinal signal, bicarbonate, which enhances the ability of ToxT to activate production of CT and TCP. The work presented here further elucidates the mechanism for the enhancement of ToxT activity by bicarbonate. Bicarbonate was found to increase the activation of ToxT-dependent accessory virulence promoters in addition to those that produce CT and TCP. Bicarbonate is taken up into the V. cholerae cell, where it positively affects ToxT activity by increasing DNA binding affinity for the virulence gene promoters that ToxT activates regardless of toxbox configuration. The increase in ToxT binding affinity in the presence of bicarbonate explains the elevated level of virulence gene transcription.

Indexed as

Bacterial ProteinsBicarbonatesGene Expression Regulation, BacterialPromoter Regions, GeneticProtein BindingTranscription FactorsVibrio choleraeVirulenceBacterial ProteinsBicarbonatestcpN protein, Vibrio choleraeTranscription Factors

Identifiers

PMID25182489
PMCPMC4248830
OpenAlexW2148523443

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.