Evidence map›Paper›PMID 25180693›Full record

ArticlePloS one2014

Natural variation for responsiveness to flg22, flgII-28, and csp22 and Pseudomonas syringae pv. tomato in heirloom tomatoes.

Selvakumar Veluchamy, Sarah R Hind, Diane M Dunham, Gregory B Martin, Dilip R Panthee

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
6.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 49 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Selvakumar VeluchamyDepartment of Horticultural Science, North Carolina State University, Mountain Horticultural Crops Research and Extension Center, Mills River, North Carolina, United States of America.
Sarah R HindBoyce Thompson Institute for Plant Research, Ithaca, New York, United States of America.
Diane M DunhamBoyce Thompson Institute for Plant Research, Ithaca, New York, United States of America.
Gregory B MartinBoyce Thompson Institute for Plant Research, Ithaca, New York, United States of America; Department of Plant Pathology and Plant-Microbe Biology, Cornell University, Ithaca, New York, United States of America.
Dilip R PantheeDepartment of Horticultural Science, North Carolina State University, Mountain Horticultural Crops Research and Extension Center, Mills River, North Carolina, United States of America.
Ithaca College · USNorth Carolina State University · USPlant (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tomato (Solanum lycopersicum L.) is susceptible to many diseases including bacterial speck caused by Pseudomonas syringae pv. tomato. Bacterial speck disease is a serious problem worldwide in tomato production areas where moist conditions and cool temperatures occur. To enhance breeding of speck resistant fresh-market tomato cultivars we identified a race 0 field isolate, NC-C3, of P. s. pv. tomato in North Carolina and used it to screen a collection of heirloom tomato lines for speck resistance in the field. We observed statistically significant variation among the heirloom tomatoes for their response to P. s. pv. tomato NC-C3 with two lines showing resistance approaching a cultivar that expresses the Pto resistance gene, although none of the heirloom lines have Pto. Using an assay that measures microbe-associated molecular pattern (MAMP)-induced production of reactive oxygen species (ROS), we investigated whether the heirloom lines showed differential responsiveness to three bacterial-derived peptide MAMPs: flg22 and flgII-28 (from flagellin) and csp22 (from cold shock protein). Significant differences were observed for MAMP responsiveness among the lines, although these differences did not correlate strongly with resistance or susceptibility to bacterial speck disease. The identification of natural variation for MAMP responsiveness opens up the possibility of using a genetic approach to identify the underlying loci and to facilitate breeding of cultivars with enhanced disease resistance. Towards this goal, we discovered that responsiveness to csp22 segregates as a single locus in an F2 population of tomato.

Indexed as

Genetic VariationAmino AcidsBacterial ProteinsDisease ResistanceFlagellinGenes, BacterialIndenesNorth CarolinaPhylogenyPlant DiseasesPseudomonas syringaeReceptors, Pattern RecognitionSolanum lycopersicumAmino AcidsBacterial ProteinscoronatineFlagellinIndenesReceptors, Pattern Recognition

Identifiers

PMID25180693
PMCPMC4152135
OpenAlexW2037773207

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.