Evidence map›Paper›PMID 25180230›Full record

ArticleThe EMBO journal2014

Dictyostelium uses ether-linked inositol phospholipids for intracellular signalling.

Jonathan Clark, Robert R Kay, Anna Kielkowska, Izabella Niewczas, Louise Fets, David Oxley, Len R Stephens, Phillip T Hawkins

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 60 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Spontaneous signal generation by an excitable system for cell migration.Frontiers in cell and developmental biology · 2024
    Review
  9. Article
  10. Synthesis of ether lipids: natural compounds and analogues.Beilstein journal of organic chemistry · 2023
    Review
  11. Article
  12. Article
  13. Wnt, GSK3, and Macropinocytosis.Sub-cellular biochemistry · 2022
    Review
  14. The Amoebal Model for Macropinocytosis.Sub-cellular biochemistry · 2022
    Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. The origins and evolution of macropinocytosis.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2019
    Review
  20. Function of small GTPases in Dictyostelium macropinocytosis.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2019
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Jonathan ClarkBabraham Biosciences Technology Babraham Research Campus, Cambridge, UK.
Robert R KayMRC Laboratory of Molecular Biology, Cambridge Biomedical Campus, Cambridge, UK rrk@mrc-lmb.cam.ac.uk len.stephens@bbsrc.ac.uk phillip.hawkins@babraham.ac.uk.
Anna KielkowskaBabraham Biosciences Technology Babraham Research Campus, Cambridge, UK.
Izabella NiewczasBabraham Biosciences Technology Babraham Research Campus, Cambridge, UK.
Louise FetsMRC Laboratory of Molecular Biology, Cambridge Biomedical Campus, Cambridge, UK.
David OxleySignalling Programme Babraham Research Campus, Cambridge, UK.
Len R StephensSignalling Programme Babraham Research Campus, Cambridge, UK rrk@mrc-lmb.cam.ac.uk len.stephens@bbsrc.ac.uk phillip.hawkins@babraham.ac.uk.
Phillip T HawkinsSignalling Programme Babraham Research Campus, Cambridge, UK rrk@mrc-lmb.cam.ac.uk len.stephens@bbsrc.ac.uk phillip.hawkins@babraham.ac.uk.
Babraham Bioscience Technologies (United Kingdom) · GBBabraham Institute · GBMRC Laboratory of Molecular Biology · GB

Funding

Biotechnology and Biological Sciences Research Council BBS/E/B/000C0415Biotechnology and Biological Sciences Research Council ISPG BB/J004456/1Medical Research Council MC_U105115237Medical Research Council U105115237
6 · The paper itself

Abstract

Inositol phospholipids are critical regulators of membrane biology throughout eukaryotes. The general principle by which they perform these roles is conserved across species and involves binding of differentially phosphorylated inositol head groups to specific protein domains. This interaction serves to both recruit and regulate the activity of several different classes of protein which act on membrane surfaces. In mammalian cells, these phosphorylated inositol head groups are predominantly borne by a C38:4 diacylglycerol backbone. We show here that the inositol phospholipids of Dictyostelium are different, being highly enriched in an unusual C34:1e lipid backbone, 1-hexadecyl-2-(11Z-octadecenoyl)-sn-glycero-3-phospho-(1'-myo-inositol), in which the sn-1 position contains an ether-linked C16:0 chain; they are thus plasmanylinositols. These plasmanylinositols respond acutely to stimulation of cells with chemoattractants, and their levels are regulated by PIPKs, PI3Ks and PTEN. In mammals and now in Dictyostelium, the hydrocarbon chains of inositol phospholipids are a highly selected subset of those available to other phospholipids, suggesting that different molecular selectors are at play in these organisms but serve a common, evolutionarily conserved purpose.

Indexed as

AnimalsDictyosteliumPhosphatidylinositolsPhospholipid EthersSignal TransductionSpectrometry, Mass, Electrospray IonizationPhosphatidylinositolsPhospholipid EthersDictyosteliumether lipidsphosphoinositidesPI3Kplasmanylinositol

Identifiers

PMID25180230
PMCPMC4282506
OpenAlexW2133495202

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.