Evidence map›Paper›PMID 25180051›Full record

ArticleHereditary cancer in clinical practice2014

Genetic screening analysis of patients with hereditary diffuse gastric cancer from northern and northeastern Brazil.

Caroline Aquino Moreira-Nunes, Mariceli Baia Leão Barros, Bárbara do Nascimento Borges, Raquel Carvalho Montenegro, Leticia Martins Lamarão, Helem Ferreira Ribeiro, Amanda Braga Bona, Paulo Pimentel Assumpção, Juan Antonio Rey, Giovanny Rebouças Pinto and 1 more

Open access · goldAbstract read
In one paragraph

Article in Hereditary cancer in clinical practice, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Identification of c.1531C>T Pathogenic Variant in theInternational journal of molecular sciences · 2019
    Article
  7. Frequency of CDH1 germline variants and contribution of dietary habits in early age onset gastric cancer patients in Brazil.Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association · 2019
    Article
  8. Observational
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

Caroline Aquino Moreira-Nunes *Biological Science Institute, Federal University of Para, Belem, PA 66075110, Brazil.
Mariceli Baia Leão BarrosBiological Science Institute, Federal University of Para, Belem, PA 66075110, Brazil.
Bárbara do Nascimento BorgesBiotecnology Institute, Federal Rural University of Amazon, Belem, PA 66077830, Brazil.
Raquel Carvalho MontenegroBiological Science Institute, Federal University of Para, Belem, PA 66075110, Brazil.
Leticia Martins LamarãoCenter of Hematology and Hemotherapy of Para - HEMOPA Foundation, Belem, PA 66033000, Brazil.
Helem Ferreira RibeiroBiological Science Institute, Federal University of Para, Belem, PA 66075110, Brazil.
Amanda Braga BonaBiological Science Institute, Federal University of Para, Belem, PA 66075110, Brazil.
Paulo Pimentel AssumpçãoNucleus of Research in Oncology, Federal University of Para, Belem, PA 66073000, Brazil.
Juan Antonio ReyMolecular Neuro-oncogenetics Laboratory, Research Unit-Unidad de Investigación, Hospital Universitario La Paz, 28046 Madrid, Spain.
Giovanny Rebouças PintoGenetics and Molecular Biology Laboratory, Federal University of Piaui, Parnaiba, PI 64049-550, Brazil.
Rommel Rodriguez BurbanoBiological Science Institute, Federal University of Para, Belem, PA 66075110, Brazil.
Universidade Federal do Pará · BRInstituto Federal de Educação, Ciência e Tecnologia do Pará · BRFundação Hemopa · BRHospital Universitario La Paz · ESUniversidade Federal do Piauí · BRUniversidade Federal Rural da Amazônia · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHereditary diffuse gastric cancer (HDGC) is a hereditary autosomal inherited syndrome associated with CDH1 germline mutations. In Brazil, gastrointestinal tumors are among the most prevalent tumor types and constitute a serious public health problem, especially in the northern and northeastern regions. This study aimed to investigate germline mutations, methylation pattern and genomic rearrangements in the CDH1 gene and quantitative changes in the DNA of HDGC patients in northern and northeastern Brazil.

methodsTwenty-seven DNA samples from the members of four families affected by HDGC were analyzed using array comparative genomic hybridization (aCGH), DNA sequencing and methylation pattern.

resultsNo evidence of gain and loss events or any rearrangements were found in any of the samples tested using aCGH. No promoter region hypermethylation was observed either. Two of the four families presented different types of germline mutations. The 185G > T and 1018A > G germline mutations detected in this study have been described in Asian and European families, respectively. The ancestors of the two families carrying these mutations had originated from those continents.

conclusionThis is the first study to evaluate CDH1 gene germline mutations in Brazilian families with HDGC. In our study, 50% of the families showed no CDH1 gene alterations, and it is possible that in regions with a high incidence of gastric cancer, such as northern and northeastern Brazil, environmental factors might have induced the different genetic alterations analyzed in this study.

Indexed as

aCGHArray comparative genomic hybridizationCDH1HDGCHereditary diffuse gastric cancer

Identifiers

PMID25180051
PMCPMC4150117
OpenAlexW2096821119

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.