Evidence map›Paper›PMID 25178290›Full record

ArticleAsian-Australasian journal of animal sciences2014

Genetic diversity and relationships of korean chicken breeds based on 30 microsatellite markers.

Sangwon Suh, Aditi Sharma, Seunghwan Lee, Chang-Yeon Cho, Jae-Hwan Kim, Seong-Bok Choi, Hyun Kim, Hwan-Hoo Seong, Seong-Hum Yeon, Dong-Hun Kim and 1 more

Abstract read
In one paragraph

Article in Asian-Australasian journal of animal sciences, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Sangwon SuhAnimal Genetic Resources Station, National Institute of Animal Science, RDA, Namwon 590-832, Korea.
Aditi SharmaHanwoo Experiment Station, Pyeongchang 232-950, Korea .
Seunghwan LeeHanwoo Experiment Station, Pyeongchang 232-950, Korea .
Chang-Yeon ChoAnimal Genetic Resources Station, National Institute of Animal Science, RDA, Namwon 590-832, Korea.
Jae-Hwan KimAnimal Genetic Resources Station, National Institute of Animal Science, RDA, Namwon 590-832, Korea.
Seong-Bok ChoiAnimal Genetic Resources Station, National Institute of Animal Science, RDA, Namwon 590-832, Korea.
Hyun KimAnimal Genetic Resources Station, National Institute of Animal Science, RDA, Namwon 590-832, Korea.
Hwan-Hoo SeongAnimal Genetic Resources Station, National Institute of Animal Science, RDA, Namwon 590-832, Korea.
Seong-Hum YeonHanwoo Experiment Station, Pyeongchang 232-950, Korea .
Dong-Hun KimAnimal Genetic Resources Station, National Institute of Animal Science, RDA, Namwon 590-832, Korea.
Yeoung-Gyu KoAnimal Genetic Resources Station, National Institute of Animal Science, RDA, Namwon 590-832, Korea.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The effective management of endangered animal genetic resources is one of the most important concerns of modern breeding. Evaluation of genetic diversity and relationship of local breeds is an important factor towards the identification of unique and valuable genetic resources. This study aimed to analyze the genetic diversity and population structure of six Korean native chicken breeds (n = 300), which were compared with three imported breeds in Korea (n = 150). For the analysis of genetic diversity, 30 microsatellite markers from FAO/ISAG recommended diversity panel or previously reported microsatellite markers were used. The number of alleles ranged from 2 to 15 per locus, with a mean of 8.13. The average observed heterozygosity within native breeds varied between 0.46 and 0.59. The overall heterozygote deficiency (F IT) in native chicken was 0.234±0.025. Over 30.7% of F IT was contributed by within-population deficiency (F IS). Bayesian clustering analysis, using the STRUCTURE software suggested 9 clusters. This study may provide the background for future studies to identify the genetic uniqueness of the Korean native chicken breeds.

Indexed as

Genetic DiversityGenetic RelationshipKorean Native ChickenMicrosatellite

Identifiers

PMID25178290
PMCPMC4150171

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.