Evidence map›Paper›PMID 25176646›Full record

ArticleCell reports2014

Adaptations to a subterranean environment and longevity revealed by the analysis of mole rat genomes.

Xiaodong Fang, Inge Seim, Zhiyong Huang, Maxim V Gerashchenko, Zhiqiang Xiong, Anton A Turanov, Yabing Zhu, Alexei V Lobanov, Dingding Fan, Sun Hee Yim and 14 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 98 papers.

0numbers the graph read from it
0cells of the map it votes in
98citing papers in PubMed
0.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

98 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. IGF-mediated glucose signalling is retained in adult naked mole-rats.Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2026
    Article
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  13. Relationship between Hypoxia and Hypercapnia Tolerance and Life Expectancy.International journal of molecular sciences · 2024
    Review
  14. Article
  15. Article
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  18. Article
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  20. Article

38 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 10 institutions in 6 countries.

Xiaodong FangBGI-Shenzhen, Shenzhen 518083, China; Department of Biology, University of Copenhagen, Copenhagen, 2200 Copenhagen N, Denmark.
Inge SeimDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA; Department of Bioinspired Science, Ewha Womans University, Seoul 120-750, South Korea.
Zhiyong HuangBGI-Shenzhen, Shenzhen 518083, China.
Maxim V GerashchenkoDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA.
Zhiqiang XiongBGI-Shenzhen, Shenzhen 518083, China.
Anton A TuranovDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA.
Yabing ZhuBGI-Shenzhen, Shenzhen 518083, China.
Alexei V LobanovDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA.
Dingding FanBGI-Shenzhen, Shenzhen 518083, China.
Sun Hee YimDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA.
Xiaoming YaoBGI-Shenzhen, Shenzhen 518083, China.
Siming MaDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA.
Lan YangBGI-Shenzhen, Shenzhen 518083, China.
Sang-Goo LeeDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA; Department of Bioinspired Science, Ewha Womans University, Seoul 120-750, South Korea.
Eun Bae KimDepartment of Bioinspired Science, Ewha Womans University, Seoul 120-750, South Korea.
Roderick T BronsonRodent Histopathology Laboratory, Harvard Medical School, Boston, MA 02115, USA.
Radim ŠumberaUniversity of South Bohemia, Faculty of Science, Ceske Budejovice 37005, Czech Republic.
Rochelle BuffensteinDepartment of Physiology and The Sam and Ann Barshop Institute for Longevity and Aging Studies, University of Texas Health Science Center, San Antonio, TX 78245, USA.
Xin ZhouBGI-Shenzhen, Shenzhen 518083, China.
Anders KroghDepartment of Biology, University of Copenhagen, Copenhagen, 2200 Copenhagen N, Denmark.
Thomas J ParkDepartment of Biological Sciences, University of Illinois at Chicago, Chicago, IL 60607, USA.
Guojie ZhangBGI-Shenzhen, Shenzhen 518083, China; Department of Biology, University of Copenhagen, Copenhagen, 2200 Copenhagen N, Denmark.
Jun WangBGI-Shenzhen, Shenzhen 518083, China; Department of Biology, University of Copenhagen, Copenhagen, 2200 Copenhagen N, Denmark; King Abdulaziz University, Jeddah 21441, Saudi Arabia. Electronic address: wangj@genomics.org.cn.
Vadim N GladyshevDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA; Department of Bioinspired Science, Ewha Womans University, Seoul 120-750, South Korea. Electronic address: vgladyshev@rics.bwh.harvard.edu.
BGI Group (China) · CNBrigham and Women's Hospital · USUniversity of Copenhagen · DKEwha Womans University · KREwha Womans University Medical Center · KRHarvard University · USHarvard University Press · USSewanee: The University of the South · USThe University of Texas Health Science Center at San Antonio · USUniversity of Illinois Chicago · US

Funding

The role of hyaluronan in longevity and cancer resistance of longest-lived rodentP01AG047200 · NIA · UNIVERSITY OF ROCHESTER · PI Vera Gorbunova · 2014 to 2026
$36.9M
Methionine sulfoxide reduction, selenium and agingR01AG021518 · NIA · UNIVERSITY OF NEBRASKA LINCOLN · PI GLADYSHEV, VADIM N. · 2003 to 2018
$5.0M
Mechanisms of lifespan controlDP1AG047745 · NIA · BRIGHAM AND WOMEN'S HOSPITAL · PI GLADYSHEV, VADIM N. · 2013 to 2018
$4.4M
IDENTITY OF TERMINATOR AND SELENOCYSTEINE UGA CODONSR01GM061603 · NIGMS · UNIVERSITY OF NEBRASKA LINCOLN · PI GLADYSHEV, VADIM N. · 2000 to 2016
$4.0M
Mechanisms of Aging in the Long-lived Naked Mole-RatR01AG022891 · NIA · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI BUFFENSTEIN, ROCHELLE · 2003 to 2007
$1.4M
Understanding the Causes of AgingR01AG038004 · NIA · BRIGHAM AND WOMEN'S HOSPITAL · PI GLADYSHEV, VADIM N. · 2010 to 2013
$1.1M
NIA NIH HHS AG021518NIA NIH HHS AG038004NIA NIH HHS AG047200NIA NIH HHS AG047745NIA NIH HHS DP1 AG047745NIA NIH HHS P01 AG047200NIA NIH HHS R01 AG021518NIA NIH HHS R01 AG022891NIA NIH HHS R01 AG038004NIGMS NIH HHS GM061603NIGMS NIH HHS R01 GM061603
6 · The paper itself

Abstract

Subterranean mammals spend their lives in dark, unventilated environments that are rich in carbon dioxide and ammonia and low in oxygen. Many of these animals are also long-lived and exhibit reduced aging-associated diseases, such as neurodegenerative disorders and cancer. We sequenced the genome of the Damaraland mole rat (DMR, Fukomys damarensis) and improved the genome assembly of the naked mole rat (NMR, Heterocephalus glaber). Comparative genome analyses, along with the transcriptomes of related subterranean rodents, revealed candidate molecular adaptations for subterranean life and longevity, including a divergent insulin peptide, expression of oxygen-carrying globins in the brain, prevention of high CO2-induced pain perception, and enhanced ammonia detoxification. Juxtaposition of the genomes of DMR and other more conventional animals with the genome of NMR revealed several truly exceptional NMR features: unusual thermogenesis, an aberrant melatonin system, pain insensitivity, and unique processing of 28S rRNA. Together, these genomes and transcriptomes extend our understanding of subterranean adaptations, stress resistance, and longevity.

Indexed as

EcosystemGenomeLongevityActinsAdaptation, PhysiologicalAmino Acid SequenceAnimalsGenetic SpeciationGlobinsInsulinMelatoninMolecular Sequence DataMole RatsPainRNA, Ribosomal, 28SThermogenesisActinsGlobinsInsulinMelatoninRNA, Ribosomal, 28S

Identifiers

PMID25176646
PMCPMC4350764
OpenAlexW1495985001

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.