Evidence map›Paper›PMID 25175731›Full record

ArticleNature communications2014

Site-specific mapping and quantification of protein S-sulphenylation in cells.

Jing Yang, Vinayak Gupta, Kate S Carroll, Daniel C Liebler

Open access · bronzeAbstract read
In one paragraph

Article in Nature communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 125 papers.

0numbers the graph read from it
0cells of the map it votes in
125citing papers in PubMed
11.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

125 citing papers in PubMed, 238 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Profiling the landscape of cysteine posttranslational modifications in brain aging and neurodegeneration.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2025
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Review
  12. Article
  13. Emerging Chemical Biology of Protein Persulfidation.Antioxidants & redox signaling · 2023
    Review
  14. Review
  15. Article
  16. Review
  17. Review
  18. Emerging chemistry and biology in protein glutathionylation.Current opinion in chemical biology · 2022
    Review
  19. Article
  20. Article

65 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jing Yang1] Departmemt of Biochemistry, Vanderbilt University School of Medicine, Nashville, Tennessee 37232-6350, USA [2] Jim Ayers Institute for Precancer Detection and Diagnosis, Vanderbilt-Ingram Cancer Center, Vanderbilt University School of Medicine, Nashville, Tennessee 37232-6350, USA.
Vinayak GuptaDepartment of Chemistry, The Scripps Research Institute, Jupiter, Florida 33458, USA.
Kate S CarrollDepartment of Chemistry, The Scripps Research Institute, Jupiter, Florida 33458, USA.
Daniel C Liebler1] Departmemt of Biochemistry, Vanderbilt University School of Medicine, Nashville, Tennessee 37232-6350, USA [2] Jim Ayers Institute for Precancer Detection and Diagnosis, Vanderbilt-Ingram Cancer Center, Vanderbilt University School of Medicine, Nashville, Tennessee 37232-6350, USA.
Scripps Research Institute · USVanderbilt University · US

Funding

Vanderbilt Proteome Characterization CenterU24CA159988 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI LIEBLER, DANIEL C · 2011 to 2016
$13.9M
Probing the role of cysteine sulfenylation in cell signalingR01GM102187 · NIGMS · UNIVERSITY OF FLORIDA · PI Kate Suzanne Carroll · 2012 to 2026
$4.6M
Nucleophilic Inhibitors for Targeting Redox-Sensitive KinasesR01CA174864 · NCI · SCRIPPS FLORIDA · PI CARROLL, KATE SUZANNE · 2014 to 2017
$1.6M
NCI NIH HHS R01 CA174864NCI NIH HHS U24 CA159988NCI NIH HHS U24CA159988NIGMS NIH HHS GM102187NIGMS NIH HHS R01 GM102187
6 · The paper itself

Abstract

Cysteine S-sulphenylation provides redox regulation of protein functions, but the global cellular impact of this transient post-translational modification remains unexplored. We describe a chemoproteomic workflow to map and quantify over 1,000 S-sulphenylation sites on more than 700 proteins in intact cells. Quantitative analysis of human cells stimulated with hydrogen peroxide or epidermal growth factor measured hundreds of site selective redox changes. Different cysteines in the same proteins displayed dramatic differences in susceptibility to S-sulphenylation. Newly discovered S-sulphenylations provided mechanistic support for proposed cysteine redox reactions and suggested novel redox mechanisms, including S-sulphenyl-mediated redox regulation of the transcription factor HIF1A by SIRT6. S-sulphenylation is favored at solvent-exposed protein surfaces and is associated with sequence motifs that are distinct from those for other thiol modifications. S-sulphenylations affect regulators of phosphorylation, acetylation and ubiquitylation, which suggest regulatory crosstalk between redox control and signalling pathways.

Indexed as

Protein Processing, Post-TranslationalAcetylationCell Line, TumorCysteineEpidermal Growth FactorEpithelial CellsGene ExpressionHumansHydrogen PeroxideHypoxia-Inducible Factor 1, alpha SubunitMolecular Sequence AnnotationOxidation-ReductionPeptide MappingPhosphorylationSirtuinsSulfenic AcidsCysteineEpidermal Growth FactorHIF1A protein, humanHydrogen PeroxideHypoxia-Inducible Factor 1, alpha SubunitSIRT6 protein, humanSirtuinsSulfenic Acids

Identifiers

PMID25175731
PMCPMC4167403
OpenAlexW2052741765

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.