Evidence map›Paper›PMID 25173874›Full record

ArticleDevelopmental biology2014

A one-dimensional model of PCP signaling: polarized cell behavior in the notochord of the ascidian Ciona.

Matthew J Kourakis, Wendy Reeves, Erin Newman-Smith, Benoit Maury, Sarah Abdul-Wajid, William C Smith

Abstract read
In one paragraph

Article in Developmental biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Review
  3. Fine-Tuned Expression of Evolutionarily Conserved Signaling Molecules in theInternational journal of molecular sciences · 2024
    Article
  4. Review
  5. Article
  6. Polarity Establishment and Maintenance in Ascidian Notochord.Frontiers in cell and developmental biology · 2020
    Review
  7. Review
  8. Review
  9. Transgenic Techniques for Investigating Cell Biology During Development.Advances in experimental medicine and biology · 2018
    Review
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Matthew J KourakisDepartment of Molecular, Cell and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA 93106, USA.
Wendy ReevesDepartment of Molecular, Cell and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA 93106, USA.
Erin Newman-SmithDepartment of Molecular, Cell and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA 93106, USA.
Benoit MauryDepartment of Molecular, Cell and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA 93106, USA.
Sarah Abdul-WajidDepartment of Molecular, Cell and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA 93106, USA.
William C SmithDepartment of Molecular, Cell and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA 93106, USA. Electronic address: william.smith@lifesci.ucsb.edu.
University of California, Santa Barbara · US

Funding

Exploring Planar Cell Polarity in A Novel Invertebrate Chordate SystemR01GM088997 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI SMITH, WILLIAM · 2010 to 2013
$1.1M
Two-Photon Microscopy for Biomedical ResearchS10RR022585 · NCRR · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI REESE, BENJAMIN E · 2007 to 2007
$500k
NCRR NIH HHS S10 RR022585NIGMS NIH HHS GM088997NIGMS NIH HHS R01 GM088997
6 · The paper itself

Abstract

Despite its importance in development and physiology the planar cell polarity (PCP) pathway remains one of the most enigmatic signaling mechanisms. The notochord of the ascidian Ciona provides a unique model for investigating the PCP pathway. Interestingly, the notochord appears to be the only embryonic structure in Ciona activating the PCP pathway. Moreover, the Ciona notochord as a single-file array of forty polarized cells is a uniquely tractable system for the study of polarization dynamics and the transmission of the PCP pathway. Here, we test models for propagation of a polarizing signal, interrogating temporal, spatial and signaling requirements. A simple cell-cell relay cascading through the entire length of the notochord is not supported; instead a more complex mechanism is revealed, with interactions influencing polarity between neighboring cells, but not distant ones. Mechanisms coordinating notochord-wide polarity remain elusive, but appear to entrain general (i.e., global) polarity even while local interactions remain important. However, this global polarizer does not appear to act as a localized, spatially-restricted determinant. Coordination of polarity along the long axis of the notochord requires the PCP pathway, a role we demonstrate is temporally distinct from this pathway's earlier role in convergent extension and intercalation. We also reveal polarity in the notochord to be dynamic: a cell's polarity state can be changed and then restored, underscoring the Ciona notochord's amenability for in vivo studies of PCP.

Indexed as

AnimalsAnimals, Genetically ModifiedBody PatterningCell PolarityCiona intestinalisEmbryo, NonmammalianGreen Fluorescent ProteinsMicroscopy, ConfocalModels, BiologicalNotochordSignal TransductionTime-Lapse ImagingGreen Fluorescent ProteinsCell polarityCionaNotochord developmentPCP

Identifiers

PMID25173874
PMCPMC4190077
OpenAlexW2051702426

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.