ArticleMolecular biotechnology2015
Basic leucine zipper family in barley: genome-wide characterization of members and expression analysis.
Article in Molecular biotechnology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
36 citing papers in PubMed, 80 citations in OpenAlex.
- Heterologous expression of the barley-specific HvbZIP87 transcription factor in wheat enhances broad-spectrum disease resistance with balanced yield.Journal of advanced research · 2026Article
- GmTRAB1, a Basic Leucine Zipper Transcription Factor, Positively Regulates Drought Tolerance in Soybean (Plants (Basel, Switzerland) · 2024Article
- Characterization of bZIP Transcription Factors in Transcriptome ofPlants (Basel, Switzerland) · 2024Article
- Genome-Wide Identification and Expression Profiling of the ABF Transcription Factor Family in Wheat (International journal of molecular sciences · 2024Article
- Identification and expression analysis of bZIP transcription factors inFrontiers in genetics · 2024Article
- Genome-wide identification, characterization and expression analysis of theFrontiers in plant science · 2024Article
- Genome-Wide Identification and Functional Analysis ofPlants (Basel, Switzerland) · 2023Article
- Identification and Functional Analysis ofInternational journal of molecular sciences · 2022Article
- Systematic identification and expression profiles of the BAHD superfamily acyltransferases in barley (Hordeum vulgare).Scientific reports · 2022Article
- Insight into the bZIP gene family inFrontiers in plant science · 2022Article
- Plant Transcription Factors Involved in Drought and Associated Stresses.International journal of molecular sciences · 2021Review
- Basic leucine zipper (bZIP) transcription factor genes and their responses to drought stress in ginseng, Panax ginseng C.A. Meyer.BMC genomics · 2021Article
- Article
- Insight into theInternational journal of molecular sciences · 2020Article
- Genome-wide analysis of the abiotic stress-related bZIP family in switchgrass.Molecular biology reports · 2020Article
- Characterization of the bZIP Transcription Factor Family in Pepper (Frontiers in plant science · 2020Article
- Regulation Mechanisms of Plant Basic Leucine Zippers to Various Abiotic Stresses.Frontiers in plant science · 2020Review
- Genome-wide identification, phylogeny, evolutionary expansion and expression analyses of bZIP transcription factor family in tartaty buckwheat.BMC genomics · 2019Article
- Genome-wide identification, structural and gene expression analysis of the bZIP transcription factor family in sweet potato wild relative Ipomoea trifida.BMC genetics · 2019Article
- Genome-wide systematic characterization of bZIP transcription factors and their expression profiles during seed development and in response to salt stress in peanut.BMC genomics · 2019Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
5 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The basic leucine zipper (bZIP) family is one of the largest and most diverse transcription factors in eukaryotes participating in many essential plant processes. We identified 141 bZIP proteins encoded by 89 genes from the Hordeum vulgare genome. HvbZIPs were classified into 11 groups based on their DNA-binding motif. Amino acid sequence alignment of the HvbZIPs basic-hinge regions revealed some highly conserved residues within each group. The leucine zipper heptads were analyzed predicting their dimerization properties. 34 conserved motifs were identified outside the bZIP domain. Phylogenetic analysis indicated that major diversification within the bZIP family predated the monocot/dicot divergence, although intra-species duplication and parallel evolution seems to be occurred afterward. Localization of HvbZIPs on the barley chromosomes revealed that different groups have been distributed on seven chromosomes of barley. Six types of intron pattern were detected within the basic-hinge regions. Most of the detected cis-elements in the promoter and UTR sequences were involved in seed development or abiotic stress response. Microarray data analysis revealed differential expression pattern of HvbZIPs in response to ABA treatment, drought, and cold stresses and during barley grain development and germination. This information would be helpful for functional characterization of bZIP transcription factors in barley.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.