Evidence map›Paper›PMID 25172144›Full record

ArticleThe Plant cell2014

Production of bioactive diterpenoids in the euphorbiaceae depends on evolutionarily conserved gene clusters.

Andrew J King, Geoffrey D Brown, Alison D Gilday, Tony R Larson, Ian A Graham

Open access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 107 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Plant terpene specialized metabolism: complex networks or simple linear pathways?The Plant journal : for cell and molecular biology · 2023
    Review
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Andrew J KingCentre for Novel Agricultural Products, Department of Biology, University of York, Heslington, York YO10 5DD, United Kingdom.
Geoffrey D BrownDepartment of Chemistry, University of Reading, Reading RG6 6AD, United Kingdom.
Alison D GildayCentre for Novel Agricultural Products, Department of Biology, University of York, Heslington, York YO10 5DD, United Kingdom.
Tony R LarsonCentre for Novel Agricultural Products, Department of Biology, University of York, Heslington, York YO10 5DD, United Kingdom.
Ian A GrahamCentre for Novel Agricultural Products, Department of Biology, University of York, Heslington, York YO10 5DD, United Kingdom ian.graham@york.ac.uk.
University of York · GBUniversity of Reading · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Euphorbiaceae produce a diverse range of diterpenoids, many of which have pharmacological activities. These diterpenoids include ingenol mebutate, which is licensed for the treatment of a precancerous skin condition (actinic keratosis), and phorbol derivatives such as resiniferatoxin and prostratin, which are undergoing investigation for the treatment of severe pain and HIV, respectively. Despite the interest in these diterpenoids, their biosynthesis is poorly understood at present, with the only characterized step being the conversion of geranylgeranyl pyrophosphate into casbene. Here, we report a physical cluster of diterpenoid biosynthetic genes from castor (Ricinus communis), including casbene synthases and cytochrome P450s from the CYP726A subfamily. CYP726A14, CYP726A17, and CYP726A18 were able to catalyze 5-oxidation of casbene, a conserved oxidation step in the biosynthesis of this family of medicinally important diterpenoids. CYP726A16 catalyzed 7,8-epoxidation of 5-keto-casbene and CYP726A15 catalyzed 5-oxidation of neocembrene. Evidence of similar gene clustering was also found in two other Euphorbiaceae, including Euphorbia peplus, the source organism of ingenol mebutate. These results demonstrate conservation of gene clusters at the higher taxonomic level of the plant family and that this phenomenon could prove useful in further elucidating diterpenoid biosynthetic pathways.

Indexed as

Genes, PlantMultigene FamilyBiosynthetic PathwaysConserved SequenceCytochrome P-450 Enzyme SystemDiterpenesEuphorbiaceaeEvolution, MolecularMolecular Sequence DataNuclear Magnetic Resonance, BiomolecularPhosphorus-Oxygen LyasesPhylogenyRicinuscasbene synthetaseCytochrome P-450 Enzyme SystemDiterpenesPhosphorus-Oxygen Lyases

Identifiers

PMID25172144
PMCPMC4371829
OpenAlexW2109779095

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.