Evidence map›Paper›PMID 25172020›Full record

ReviewTrends in genetics : TIG2014

Worms, bacteria, and micronutrients: an elegant model of our diet.

Lutfu Safak Yilmaz, Albertha J M Walhout

Open access · greenAbstract readReview
In one paragraph

Review in Trends in genetics : TIG, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 94 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Selenium-EnrichedAntioxidants (Basel, Switzerland) · 2024
    Article
  10. Article
  11. Article
  12. Article
  13. PMGut microbes · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Live or death in cells: from micronutrition metabolism to cell fate.Frontiers in cell and developmental biology · 2023
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Lutfu Safak YilmazProgram in Systems Biology, Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA, USA.
Albertha J M WalhoutProgram in Systems Biology, Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA, USA. Electronic address: marian.walhout@umassmed.edu.
University of Massachusetts Chan Medical School · US

Funding

Transcription networks in C elegans organogenesisR01DK068429 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI A. J. Marian Walhout · 2005 to 2026
$10.9M
Gene Regulatory Networks in Development and PhysiologyR56DK068429 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI WALHOUT, A. J. MARIAN · 2018 to 2018
$671k
Modeling of the metabolic network of Caenorhabditis elegansR21GM108045 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI WALHOUT, A. J. MARIAN · 2015 to 2016
$461k
NIDDK NIH HHS DK068429NIDDK NIH HHS R01 DK068429NIDDK NIH HHS R56 DK068429NIGMS NIH HHS R21 GM108045
6 · The paper itself

Abstract

Micronutrients are required in small proportions in a diet to carry out key metabolic roles for biomass and energy production. Humans receive micronutrients either directly from their diet or from gut microbiota that metabolize other nutrients. The nematode Caenorhabditis elegans and its bacterial diet provide a relatively simple and genetically tractable model to study both direct and microbe-mediated effects of micronutrients. Recently, this model has been used to gain insight into the relationship between micronutrients, physiology, and metabolism. In particular, two B-type vitamins, vitamin B12 and folate, have been studied in detail. Here we review how C. elegans and its bacterial diet provide a powerful interspecies systems biology model that facilitates the precise delineation of micronutrient effects and the mechanisms involved.

Indexed as

DietAnimalsBacteriaBacterial Physiological PhenomenaCaenorhabditis elegansHost-Pathogen InteractionsHumansMetabolic Networks and PathwaysMicronutrientsModels, AnimalMicronutrientsCaenorhabditis elegansfolategut microbiotametabolismmicronutrientsvitamin B

Identifiers

PMID25172020
PMCPMC4399232
OpenAlexW2070642752

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.