Evidence map›Paper›PMID 25171408›Full record

ArticleCell2014

An evolutionarily conserved prion-like element converts wild fungi from metabolic specialists to generalists.

Daniel F Jarosz, Alex K Lancaster, Jessica C S Brown, Susan Lindquist

Abstract read
In one paragraph

Article in Cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Evolutionary cell biology comes of age.Journal of cell science · 2025
    Article
  5. Article
  6. How Big Is the Yeast Prion Universe?International journal of molecular sciences · 2023
    Review
  7. Article
  8. Article
  9. Article
  10. Quiescence inAnnual review of genetics · 2022
    Review
  11. Truth in wine yeast.Microbial biotechnology · 2022
    Review
  12. Review
  13. Review
  14. Review
  15. Article
  16. Review
  17. FUS and TDP-43 Phases in Health and Disease.Trends in biochemical sciences · 2021
    Review
  18. Protein aggregation and the evolution of stress resistance in clinical yeast.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2021
    Article
  19. Article
  20. Protein self-assembly: A new frontier in cell signaling.Current opinion in cell biology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Daniel F JaroszWhitehead Institute for Biomedical Research, Cambridge, MA 02142, USA; Departments of Chemical and Systems Biology and of Developmental Biology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Alex K LancasterWhitehead Institute for Biomedical Research, Cambridge, MA 02142, USA; Department of Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA 02215, USA; Center for Biomedical Informatics, Harvard Medical School, Boston, MA 02115, USA.
Jessica C S BrownWhitehead Institute for Biomedical Research, Cambridge, MA 02142, USA; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Susan LindquistWhitehead Institute for Biomedical Research, Cambridge, MA 02142, USA; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Howard Hughes Medical Institute, Chevy Chase, MD 20815, USA. Electronic address: lindquist_admin@wi.mit.edu.

Funding

Quantitative analysis of the evolving genotype-to-phenotype mapR00GM098600 · NIGMS · STANFORD UNIVERSITY · PI JAROSZ, DANIEL · 2013 to 2015
$728k
Quantitative analysis of the evolving genotype-to-phenotype mapK99GM098600 · NIGMS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI JAROSZ, DANIEL · 2011 to 2012
$134k
Howard Hughes Medical InstituteNIGMS NIH HHS K99 GM098600NIGMS NIH HHS R00 GM098600
6 · The paper itself

Abstract

[GAR(+)] is a protein-based element of inheritance that allows yeast (Saccharomyces cerevisiae) to circumvent a hallmark of their biology: extreme metabolic specialization for glucose fermentation. When glucose is present, yeast will not use other carbon sources. [GAR(+)] allows cells to circumvent this "glucose repression." [GAR(+)] is induced in yeast by a factor secreted by bacteria inhabiting their environment. We report that de novo rates of [GAR(+)] appearance correlate with the yeast's ecological niche. Evolutionarily distant fungi possess similar epigenetic elements that are also induced by bacteria. As expected for a mechanism whose adaptive value originates from the selective pressures of life in biological communities, the ability of bacteria to induce [GAR(+)] and the ability of yeast to respond to bacterial signals have been extinguished repeatedly during the extended monoculture of domestication. Thus, [GAR(+)] is a broadly conserved adaptive strategy that links environmental and social cues to heritable changes in metabolism.

Indexed as

Epigenesis, GeneticAscomycotaBacteriaDekkeraGlucosePhenotypePrionsSaccharomyces cerevisiaeGlucosePrions

Identifiers

PMID25171408
PMCPMC4424049

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.