Evidence map›Paper›PMID 25171199›Full record

ArticlePloS one2014

Transcriptional regulation of cell cycle genes in response to abiotic stresses correlates with dynamic changes in histone modifications in maize.

Lin Zhao, Pu Wang, Haoli Hou, Hao Zhang, Yapei Wang, Shihan Yan, Yan Huang, Hui Li, Junjun Tan, Ao Hu and 6 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
5.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 89 citations in OpenAlex.

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  17. International journal of molecular sciences · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 1 institution in 1 country.

Lin ZhaoState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Pu WangState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Haoli HouState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Hao ZhangState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Yapei WangState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Shihan YanState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Yan HuangState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Hui LiState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Junjun TanState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Ao HuState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Fei GaoState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Qi ZhangState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Yingnan LiState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Hong ZhouState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Wei ZhangRenmin Hospital, Wuhan University, Wuhan, China.
Lijia LiState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Wuhan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The histone modification level has been shown to be related with gene activation and repression in stress-responsive process, but there is little information on the relationship between histone modification and cell cycle gene expression responsive to environmental cues. In this study, the function of histone modifications in mediating the transcriptional regulation of cell cycle genes under various types of stress was investigated in maize (Zea mays L.). Abiotic stresses all inhibit the growth of maize seedlings, and induce total acetylation level increase compared with the control group in maize roots. The positive and negative regulation of the expression of some cell cycle genes leads to perturbation of cell cycle progression in response to abiotic stresses. Chromatin immunoprecipitation analysis reveals that dynamic histone acetylation change in the promoter region of cell cycle genes is involved in the control of gene expression in response to external stress and different cell cycle genes have their own characteristic patterns for histone acetylation. The data also showed that the combinations of hyperacetylation and hypoacetylation states of specific lysine sites on the H3 and H4 tails on the promoter regions of cell cycle genes regulate specific cell cycle gene expression under abiotic stress conditions, thus resulting in prolonged cell cycle duration and an inhibitory effect on growth and development in maize seedlings.

Indexed as

Gene Expression Regulation, DevelopmentalGene Expression Regulation, PlantAcetylationBlotting, WesternCell CycleCell Cycle ProteinsCold TemperatureCopper SulfateFlow CytometryHistonesHot TemperatureLysineMannitolPlant ProteinsPlant RootsPromoter Regions, GeneticCell Cycle ProteinsCopper SulfateHistonesLysineMannitolPlant ProteinsSodium Chloride

Identifiers

PMID25171199
PMCPMC4149478
OpenAlexW2088523883

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.