Evidence map›Paper›PMID 25170683›Full record

ArticleInternational journal of environmental research and public health2014

Identification of diarrheagenic Escherichia coli strains from avian organic fertilizers.

Juan Puño-Sarmiento, Luis Eduardo Gazal, Leonardo P Medeiros, Erick K Nishio, Renata K T Kobayashi, Gerson Nakazato

Open access · goldAbstract read
In one paragraph

Article in International journal of environmental research and public health, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 19 citations in OpenAlex.

  1. Absence of Shiga toxin-producing Escherichia coli (STEC) in organic leafy greens from the metropolitan region of São Paulo, Brazil.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2023
    Article
  2. Article
  3. Review
  4. Shiga-Toxin ProducingMicroorganisms · 2019
    Review
  5. Diarrheagenic Escherichia coli.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2016
    Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Juan Puño-SarmientoDepartment of Microbiology, Center of Biological Sciences, University of Londrina, Londrina, Paraná CP 6001, Brazil.
Luis Eduardo GazalDepartment of Microbiology, Center of Biological Sciences, University of Londrina, Londrina, Paraná CP 6001, Brazil. gazal_26@hotmail.com.
Leonardo P MedeirosDepartment of Microbiology, Center of Biological Sciences, University of Londrina, Londrina, Paraná CP 6001, Brazil. leomedeiros27@gmail.com.
Erick K NishioDepartment of Microbiology, Center of Biological Sciences, University of Londrina, Londrina, Paraná CP 6001, Brazil. erick.nishio@yahoo.com.
Renata K T KobayashiDepartment of Microbiology, Center of Biological Sciences, University of Londrina, Londrina, Paraná CP 6001, Brazil. kobayashirkt@uel.br.
Gerson NakazatoDepartment of Microbiology, Center of Biological Sciences, University of Londrina, Londrina, Paraná CP 6001, Brazil. gersonakazato@yahoo.com.br.
Universidade Estadual de Londrina · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Brazilian poultry industry generates large amounts of organic waste, such as chicken litter, which is often used in agriculture. Among the bacteria present in organic fertilizer are members of the Enterobacteriaceae family. The objective of this study was to detect the presence of diarrheagenic Escherichia coli (DEC) strains in avian organic fertilizer, and assess the potential damage they can cause in humans due to antimicrobial resistance. The presence of DEC pathotypes and phylogenetic groups were detected by multiplex-PCR. Phenotypic assays, such as tests for adhesion, cytotoxicity activity, biofilm formation and especially antimicrobial susceptibility, were performed. Fifteen DEC strains from 64 E. coli were isolated. Among these, four strains were classified as enteropathogenic (EPEC; 6.2%), three strains as Shiga toxin-producing (STEC; 4.7%), 10 strains as enteroaggregative (EAEC; 12.5%), but two of these harbored the eaeA gene too. The low number of isolated strains was most likely due to the composting process, which reduces the number of microorganisms. These strains were able to adhere to HEp-2 and HeLa cells and produce Shiga-toxins and biofilms; in addition, some of the strains showed antimicrobial resistance, which indicates a risk of the transfer of resistance genes to human E. coli. These results showed that DEC strains isolated from avian organic fertilizers can cause human infections.

Indexed as

AnimalsBirdsBrazilDiarrheaEnteropathogenic Escherichia coliEscherichia coliEscherichia coli InfectionsFertilizersHumansMolecular Sequence DataMultiplex Polymerase Chain ReactionPhylogenySequence Analysis, DNAShiga-Toxigenic Escherichia coliFertilizers

Identifiers

PMID25170683
PMCPMC4198998
OpenAlexW2085846607

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.