Evidence map›Paper›PMID 25170082›Full record

ArticleThe Journal of biological chemistry2014

Mechanisms of mitochondrial holocytochrome c synthase and the key roles played by cysteines and histidine of the heme attachment site, Cys-XX-Cys-His.

Shalon E Babbitt, Brian San Francisco, Deanna L Mendez, Gudrun S Lukat-Rodgers, Kenton R Rodgers, Eric C Bretsnyder, Robert G Kranz

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Mechanisms of heme transport in the mitochondria.Biochemical Society transactions · 2025
    Review
  3. Article
  4. Biogenesis of CytochromesACS infectious diseases · 2025
    Article
  5. Article
  6. Article
  7. Biogenesis of cytochromesbioRxiv : the preprint server for biology · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Engineered holocytochromeProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Shalon E BabbittFrom the Department of Biology, Washington University, St. Louis, Missouri 63130 and.
Brian San FranciscoFrom the Department of Biology, Washington University, St. Louis, Missouri 63130 and.
Deanna L MendezFrom the Department of Biology, Washington University, St. Louis, Missouri 63130 and.
Gudrun S Lukat-Rodgersthe Department of Chemistry and Biochemistry, North Dakota State University, Fargo, North Dakota 58102.
Kenton R Rodgersthe Department of Chemistry and Biochemistry, North Dakota State University, Fargo, North Dakota 58102.
Eric C BretsnyderFrom the Department of Biology, Washington University, St. Louis, Missouri 63130 and.
Robert G KranzFrom the Department of Biology, Washington University, St. Louis, Missouri 63130 and kranz@biology.wustl.edu.

Funding

MOLECULAR GENETIC ANALYSES OF CYTOCHROMES C BIOGENESISR01GM047909 · NIGMS · WASHINGTON UNIVERSITY · PI KRANZ, ROBERT G. · 1994 to 2019
$6.0M
Study of heme uptake and transport proteins from P. aerugenosa and S. dysenteriaeR15AI072719 · NIAID · NORTH DAKOTA STATE UNIVERSITY · PI RODGERS, KENTON · 2007 to 2011
$707k
NIAID NIH HHS R01 AI072719NIAID NIH HHS R15 AI072719NIGMS NIH HHS R01 GM047909NIGMS NIH HHS R01 GM47909
6 · The paper itself

Abstract

Mitochondrial cytochrome c assembly requires the covalent attachment of heme by thioether bonds between heme vinyl groups and a conserved CXXCH motif of cytochrome c/c1. The enzyme holocytochrome c synthase (HCCS) binds heme and apocytochrome c substrate to catalyze this attachment, subsequently releasing holocytochrome c for proper folding to its native structure. We address mechanisms of assembly using a functional Escherichia coli recombinant system expressing human HCCS. Human cytochrome c variants with individual cysteine, histidine, double cysteine, and triple cysteine/histidine substitutions (of CXXCH) were co-purified with HCCS. Single and double mutants form a complex with HCCS but not the triple mutant. Resonance Raman and UV-visible spectroscopy support the proposal that heme puckering induced by both thioether bonds facilitate release of holocytochrome c from the complex. His-19 (of CXXCH) supplies the second axial ligand to heme in the complex, the first axial ligand was previously shown to be from HCCS residue His-154. Substitutions of His-19 in cytochrome c to seven other residues (Gly, Ala, Met, Arg, Lys, Cys, and Tyr) were used with various approaches to establish other roles played by His-19. Three roles for His-19 in HCCS-mediated assembly are suggested: (i) to provide the second axial ligand to the heme iron in preparation for covalent attachment; (ii) to spatially position the two cysteinyl sulfurs adjacent to the two heme vinyl groups for thioether formation; and (iii) to aid in release of the holocytochrome c from the HCCS active site. Only H19M is able to carry out these three roles, albeit at lower efficiencies than the natural His-19.

Indexed as

Binding SitesCatalytic DomainConserved SequenceCysteineCytochromes cEscherichia coliHemeHistidineHumansLigandsLyasesMitochondriaOligonucleotidesPlasmidsProtein FoldingPyridinesCysteinecytochrome C synthetaseCytochromes cHemeHistidineLigandsLyasesOligonucleotidesPyridinesSulfhydryl CompoundsCytochrome cHemeHistidineMitochondriaRaman Spectroscopy

Identifiers

PMID25170082
PMCPMC4200240

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.