Evidence map›Paper›PMID 25170080›Full record

ArticleThe Journal of biological chemistry2014

HIV-1 protein Nef inhibits activity of ATP-binding cassette transporter A1 by targeting endoplasmic reticulum chaperone calnexin.

Lucas Jennelle, Ruth Hunegnaw, Larisa Dubrovsky, Tatiana Pushkarsky, Michael L Fitzgerald, Dmitri Sviridov, Anastas Popratiloff, Beda Brichacek, Michael Bukrinsky

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
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  8. Role ofJournal of personalized medicine · 2022
    Review
  9. The Role of the ATP-Binding Cassette A1 (ABCA1) in Human Disease.International journal of molecular sciences · 2021
    Review
  10. Article
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  12. Review
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  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Lucas JennelleFrom the George Washington University School of Medicine and Health Sciences, Washington, D. C. 20037.
Ruth HunegnawFrom the George Washington University School of Medicine and Health Sciences, Washington, D. C. 20037.
Larisa DubrovskyFrom the George Washington University School of Medicine and Health Sciences, Washington, D. C. 20037.
Tatiana PushkarskyFrom the George Washington University School of Medicine and Health Sciences, Washington, D. C. 20037.
Michael L Fitzgeraldthe Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts 02114.
Dmitri Sviridovthe Baker IDI Heart and Diabetes Institute, Melbourne, Victoria 3004, Australia, and.
Anastas Popratiloffthe George Washington Center for Microscopy and Image Analysis, Office of VP for Research, Washington, D. C. 20037.
Beda BrichacekFrom the George Washington University School of Medicine and Health Sciences, Washington, D. C. 20037.
Michael BukrinskyFrom the George Washington University School of Medicine and Health Sciences, Washington, D. C. 20037, mbukrins@gwu.edu.
George Washington University · USBaker Heart and Diabetes Institute · AU

Funding

The District of Columbia Developmental Center for AIDS Research (DC D-CFAR)P30AI087714 · NIAID · GEORGE WASHINGTON UNIVERSITY · PI GREENBERG, ALAN EDWARD · 2010 to 2014
$8.4M
HIV Disease and Impairement of High Density Lipoprotein MetabolismR01HL101274 · NHLBI · GEORGE WASHINGTON UNIVERSITY · PI BUKRINSKY, MICHAEL ILYA, FITZGERALD, MICHAEL LEO · 2010 to 2015
$4.0M
HDL prevention of cholesterol crystal inflammation in HIV diseaseR01HL112661 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI FITZGERALD, MICHAEL LEO, LATZ, EICKE · 2012 to 2016
$3.1M
Mechanisms of virus-induced impairment of reverse cholesterol transportR01HL093818 · NHLBI · GEORGE WASHINGTON UNIVERSITY · PI BUKRINSKY, MICHAEL ILYA, SVIRIDOV, DMITRI · 2009 to 2013
$1.6M
Acquisition of Zeiss 710 Confocal Laser Scanning MicroscopeS10RR025565 · NCRR · GEORGE WASHINGTON UNIVERSITY · PI POPRATILOFF, ANASTAS · 2009 to 2009
$500k
Acquisition of Zeiss Cell Observer Spinning Disk Confocal SystemS10OD010710 · OD · GEORGE WASHINGTON UNIVERSITY · PI POPRATILOFF, ANASTAS · 2012 to 2012
$500k
HIV-1 Nef regulates activity of the ER chaperone calnexinR21AI108533 · NIAID · GEORGE WASHINGTON UNIVERSITY · PI BUKRINSKY, MICHAEL ILYA · 2014 to 2015
$432k
NCRR NIH HHS S10 RR025565NHLBI NIH HHS HL093818NHLBI NIH HHS HL101274NHLBI NIH HHS R01 HL093818NHLBI NIH HHS R01 HL101274NHLBI NIH HHS R01 HL112661NIAID NIH HHS 5P30AI087714NIAID NIH HHS AI108533NIAID NIH HHS P30 AI087714NIAID NIH HHS R21 AI108533NIH HHS S10 OD010710
6 · The paper itself

Abstract

HIV-infected patients are at increased risk of developing atherosclerosis, in part due to an altered high density lipoprotein profile exacerbated by down-modulation and impairment of ATP-binding cassette transporter A1 (ABCA1) activity by the HIV-1 protein Nef. However, the mechanisms of this Nef effect remain unknown. Here, we show that Nef interacts with an endoplasmic reticulum chaperone calnexin, which regulates folding and maturation of glycosylated proteins. Nef disrupted interaction between calnexin and ABCA1 but increased affinity and enhanced interaction of calnexin with HIV-1 gp160. The Nef mutant that did not bind to calnexin did not affect the calnexin-ABCA1 interaction. Interaction with calnexin was essential for functionality of ABCA1, as knockdown of calnexin blocked the ABCA1 exit from the endoplasmic reticulum, reduced ABCA1 abundance, and inhibited cholesterol efflux; the same effects were observed after Nef overexpression. However, the effects of calnexin knockdown and Nef on cholesterol efflux were not additive; in fact, the combined effect of these two factors together did not differ significantly from the effect of calnexin knockdown alone. Interestingly, gp160 and ABCA1 interacted with calnexin differently; although gp160 binding to calnexin was dependent on glycosylation, glycosylation was of little importance for the interaction between ABCA1 and calnexin. Thus, Nef regulates the activity of calnexin to stimulate its interaction with gp160 at the expense of ABCA1. This study identifies a mechanism for Nef-dependent inactivation of ABCA1 and dysregulation of cholesterol metabolism.

Indexed as

AtherosclerosisATP Binding Cassette Transporter 1CalnexinCholesterolEndoplasmic ReticulumGlycosylationHEK293 CellsHeLa CellsHIV-1HIV Envelope Protein gp160Humansnef Gene Products, Human Immunodeficiency VirusProtein BindingSpectrometry, Mass, Electrospray IonizationTandem Mass SpectrometryABCA1 protein, humanATP Binding Cassette Transporter 1CalnexinCholesterolgp160 protein, Human immunodeficiency virus 1HIV Envelope Protein gp160nef Gene Products, Human Immunodeficiency Virusnef protein, Human immunodeficiency virus 1AtherosclerosisCholesterol RegulationConfocal MicroscopyEndoplasmic Reticulum (ER)Human Immunodeficiency Virus (HIV)

Identifiers

PMID25170080
PMCPMC4200247
OpenAlexW2045605961

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.