Evidence map›Paper›PMID 25169151›Full record

ReviewAmerican journal of medical genetics. Part C, Seminars in medical genetics2014

SWI/SNF chromatin remodeling complexes and cancer.

Jaclyn A Biegel, Tracy M Busse, Bernard E Weissman

Open access · bronzeAbstract readReview
In one paragraph

Review in American journal of medical genetics. Part C, Seminars in medical genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 95 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
95citing papers in PubMed, 2 pooled it
8.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

95 citing papers in PubMed, 2 syntheses or guidelines pooled it, 185 citations in OpenAlex.

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  16. IJU case reports · 2023
    Article
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  20. Nucleosome destabilization by polyamines.Archives of biochemistry and biophysics · 2022
    Article

35 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Jaclyn A Biegel
Tracy M Busse
Bernard E Weissman
Purdue University West Lafayette · USUnion College · US

Funding

MOLECULAR CYTOGENETICS: PEDIATRIC CNS TUMORSR01CA046274 · NCI · CHILDREN'S HOSP OF PHILADELPHIA · PI BIEGEL, JACLYN A · 1989 to 2012
$2.7M
Role of hsnf5/BAF47 Loss in Human Cancer DevelopmentR01CA091048 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI WEISSMAN, BERNARD E. · 2002 to 2012
$2.3M
SWI/SNF complex loss facilitates gene silencing during NSCLC developmentR01CA138841 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI WEISSMAN, BERNARD E. · 2009 to 2010
$614k
NCI NIH HHS CA138841NCI NIH HHS CA46274NCI NIH HHS CA91048NCI NIH HHS R01 CA046274NCI NIH HHS R01 CA091048NCI NIH HHS R01 CA138841
6 · The paper itself

Abstract

The identification of mutations and deletions in the SMARCB1 locus in chromosome band 22q11.2 in pediatric rhabdoid tumors provided the first evidence for the involvement of the SWI/SNF chromatin remodeling complex in cancer. Over the last 15 years, alterations in more than 20 members of the complex have been reported in a variety of human tumors. These include germline mutations and copy number alterations in SMARCB1, SMARCA4, SMARCE1, and PBRM1 that predispose carriers to both benign and malignant neoplasms. Somatic mutations, structural abnormalities, or epigenetic modifications that lead to reduced or aberrant expression of complex members have now been reported in more than 20% of malignancies, including both solid tumors and hematologic disorders in both children and adults. In this review, we will highlight the role of SMARCB1 in cancer as a paradigm for other tumors with alterations in SWI/SNF complex members and demonstrate the broad spectrum of mutations observed in complex members in different tumor types.

Indexed as

Chromatin Assembly and DisassemblyAnimalsCarcinoma, Renal CellChromosomal Proteins, Non-HistoneDisease Models, AnimalDNA-Binding ProteinsDNA HelicasesGenetic Predisposition to DiseaseHumansKidney NeoplasmsMice, KnockoutMutationNeoplasmsNeurilemmomaNeurofibromatosesNuclear ProteinsChromosomal Proteins, Non-HistoneDNA-Binding ProteinsDNA HelicasesNuclear ProteinsPBRM1 protein, humanSMARCA4 protein, humanSMARCB1 ProteinSMARCB1 protein, humanSmarcb1 protein, mouseSMARCE1 protein, humanTranscription Factorsrhabdoid tumorSMARCA4SMARCB1SWI/SNF

Identifiers

PMID25169151
PMCPMC4516040
OpenAlexW1920450187

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.