Evidence map›Paper›PMID 25168179›Full record

ArticleBMC genomics2014

Analysis of the Caulobacter crescentus Zur regulon reveals novel insights in zinc acquisition by TonB-dependent outer membrane proteins.

Ricardo Ruiz Mazzon, Vânia Santos Braz, José Freire da Silva Neto, Marilis do Valle Marques

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Article in BMC genomics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Deletion ofApplied and environmental microbiology · 2026
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  3. A co-conserved gene pair supportsJournal of bacteriology · 2025
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  5. A co-conserved gene pair supportsbioRxiv : the preprint server for biology · 2025
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  6. Article
  7. Transcriptome analysis ofFrontiers in microbiology · 2025
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  8. Review
  9. Article
  10. Article
  11. Zinc homeostasis in Pseudomonas.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2023
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. A Small RNA Is Linking CRISPR-Cas and Zinc Transport.Frontiers in molecular biosciences · 2021
    Article
  18. Article
  19. Article
  20. Article
4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Ricardo Ruiz Mazzon
Vânia Santos Braz
José Freire da Silva Neto
Marilis do Valle MarquesDepartamento de Microbiologia, Instituto de Ciências Biomédicas, Universidade de São Paulo, Av, Prof, Lineu Prestes 1374, 05508-900 São Paulo, Brazil. mvmarque@usp.br.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIntracellular zinc concentration needs to be maintained within strict limits due to its toxicity at high levels, and this is achieved by a finely regulated balance between uptake and efflux. Many bacteria use the Zinc Uptake Regulator Zur to orchestrate zinc homeostasis, but little is known regarding the transport of this metal across the bacterial outer membrane.

resultsIn this work we determined the Caulobacter crescentus Zur regulon by global transcriptional and in silico analyses. Among the genes directly repressed by Zur in response to zinc availability are those encoding a putative high affinity ABC uptake system (znuGHI), three TonB-dependent receptors (znuK, znuL and znuM) and one new putative transporter of a family not yet characterized (zrpW). Zur is also directly involved in the activation of a RND and a P-type ATPase efflux systems, as revealed by β-galactosidase and site-directed mutagenesis assays. Several genes belonging to the Fur regulon were also downregulated in the zur mutant, suggesting a putative cross-talk between Zur and Fur regulatory networks. Interestingly, a phenotypic analysis of the znuK and znuL mutants has shown that these genes are essential for growth under zinc starvation, suggesting that C. crescentus uses these TonB-dependent outer membrane transporters as key zinc scavenging systems.

conclusionsThe characterization of the C. crescentus Zur regulon showed that this regulator coordinates not only uptake, but also the extrusion of zinc. The uptake of zinc by C. crescentus in conditions of scarcity of this metal is highly dependent on TonB-dependent receptors, and the extrusion is mediated by an RND and P-type ATPase transport systems. The absence of Zur causes a disturbance in the dynamic equilibrium of zinc intracellular concentration, which in turn can interfere with other regulatory networks as seen for the Fur regulon.

Indexed as

RegulonATP-Binding Cassette TransportersBacterial Outer Membrane ProteinsBacterial ProteinsBase SequenceCaulobacter crescentusGene Expression ProfilingGene Expression Regulation, BacterialMembrane ProteinsMolecular Sequence DataMutagenesis, Site-DirectedRepressor ProteinsSequence AlignmentSequence Analysis, DNAZincATP-Binding Cassette TransportersBacterial Outer Membrane ProteinsBacterial Proteinsferric uptake regulating proteins, bacterialMembrane ProteinsRepressor ProteinstonB protein, BacteriaZinc

Identifiers

PMID25168179
PMCPMC4176598

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.