Evidence map›Paper›PMID 25165601›Full record

ArticleJournal of the Royal Society, Interface2014

Simple and accurate methods for quantifying deformation, disruption, and development in biological tissues.

John J Boyle, Maiko Kume, Matthew A Wyczalkowski, Larry A Taber, Robert B Pless, Younan Xia, Guy M Genin, Stavros Thomopoulos

Abstract read
In one paragraph

Article in Journal of the Royal Society, Interface, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Paralysis by analysis: Overcoming cardiac contraction with computer vision.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  7. Guidelines for ex vivo mechanical testing of tendon.Journal of orthopaedic research : official publication of the Orthopaedic Research Society · 2023
    Review
  8. Virtual blebbistatin: A robust and rapid software approach to motion artifact removal in optical mapping of cardiomyocytes.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  9. Quantitative Validation of MRI-Based Motion Estimation for Brain Impact Biomechanics.Computational biomechanics for medicine. Personalisation, validation and therapy · 2020
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Mechanically induced CaBone research · 2018
    Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

John J BoyleDepartment of Orthopaedic Surgery, Washington University, St Louis, MO 63130, USA Department of Biomedical Engineering, Washington University, St Louis, MO 63130, USA.
Maiko KumeDepartment of Biomedical Engineering, Washington University, St Louis, MO 63130, USA.
Matthew A WyczalkowskiDepartment of Biomedical Engineering, Washington University, St Louis, MO 63130, USA.
Larry A TaberDepartment of Biomedical Engineering, Washington University, St Louis, MO 63130, USA.
Robert B PlessDepartment of Computer Science and Engineering, Washington University, St Louis, MO 63130, USA.
Younan XiaThe Wallace H. Coulter Department of Biomedical Engineering, School of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, GA 30332, USA.
Guy M GeninDepartment of Mechanical Engineering and Materials Science, Washington University, St Louis, MO 63130, USA genin@wustl.edu.
Stavros ThomopoulosDepartment of Orthopaedic Surgery, Washington University, St Louis, MO 63130, USA Department of Mechanical Engineering and Materials Science, Washington University, St Louis, MO 63130, USA Department of Biomedical Engineering, Washington University, St Louis, MO 63130, USA thomopouloss@wudosis.wustl.edu.

Funding

Cross-scale interactions between mineral and collagen for tendon-bone attachmentU01EB016422 · NIBIB · WASHINGTON UNIVERSITY · PI GENIN, GUY M, THOMOPOULOS, STAVROS · 2013 to 2017
$2.4M
Nanofiber Scaffolds with Gradations in Mineral Content for Rotator Cuff RepairR01AR060820 · NIAMS · WASHINGTON UNIVERSITY · PI GALATZ, LEESA M, THOMOPOULOS, STAVROS · 2011 to 2015
$2.2M
THE EFFECTS OF MYOFIBROBLASTS ON ELECTROMECHANICAL FUNCTION OF MODEL HEART TISSUER01HL109505 · NHLBI · WASHINGTON UNIVERSITY · PI ELSON, ELLIOT L., GENIN, GUY M · 2012 to 2015
$2.0M
NHLBI NIH HHS HL109505NIAMS NIH HHS AR060820NIAMS NIH HHS R01 AR060820NIBIB NIH HHS U01 EB016422NIBIB NIH HHS U01EB016422
6 · The paper itself

Abstract

When mechanical factors underlie growth, development, disease or healing, they often function through local regions of tissue where deformation is highly concentrated. Current optical techniques to estimate deformation can lack precision and accuracy in such regions due to challenges in distinguishing a region of concentrated deformation from an error in displacement tracking. Here, we present a simple and general technique for improving the accuracy and precision of strain estimation and an associated technique for distinguishing a concentrated deformation from a tracking error. The strain estimation technique improves accuracy relative to other state-of-the-art algorithms by directly estimating strain fields without first estimating displacements, resulting in a very simple method and low computational cost. The technique for identifying local elevation of strain enables for the first time the successful identification of the onset and consequences of local strain concentrating features such as cracks and tears in a highly strained tissue. We apply these new techniques to demonstrate a novel hypothesis in prenatal wound healing. More generally, the analytical methods we have developed provide a simple tool for quantifying the appearance and magnitude of localized deformation from a series of digital images across a broad range of disciplines.

Indexed as

AlgorithmsModels, BiologicalImage Processing, Computer-Assistedmaterial failurestrain localizationtexture correlation

Identifiers

PMID25165601
PMCPMC4191098

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.